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Protein
Submitted name:

Ribulose bisphosphate carboxylase

Gene

cbbM

Organism
Desulfovibrio hydrothermalis AM13 = DSM 14728
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Name:cbbMImported
ORF Names:DESAM_22949Imported
OrganismiDesulfovibrio hydrothermalis AM13 = DSM 14728Imported
Taxonomic identifieri1121451 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000010808 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0RHZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQYDQTSRY ANFDLKEDQL IADGNHVLCA YIFKPAEGHG HIEVAAHFAA
60 70 80 90 100
ESSTGTNVEV CTTDDFTKGV DALVYEVSEA KDGDYLMKIA YPVELFDRNI
110 120 130 140 150
IDGRAMLASF LTLCIGNNQG MGDVAYAKMY DFYVPRQYLE LFDGPAKNIA
160 170 180 190 200
DFWRMLGRPM ENGGMIVGTI VKPKLGLRPG PFADACYKFW LGGDFVKNDE
210 220 230 240 250
PQGNQVFAPL KETITAVADA MKRAQDETGE AKVFSANITA DDPMEMIARG
260 270 280 290 300
EFILDAFGED ASRVAFLVDG YVAGPTSITT ARRNFPNQFL HYHRAGHGAV
310 320 330 340 350
TSPQAKRGYT AFVLSKMSRL QGASGIHTGT MGFGKMEGEM ADKNIAYMIE
360 370 380 390 400
REEAQGPYFK QKWYGMKATT PMISGGMNAL RLPGFFENLG HSNICQTSGG
410 420 430 440 450
GAFGHLDGPT AGAISLRQSH EAWQQGVDLV EYAKAHKELA RAFESFPQDA
460
DKFYPDWRKQ LSL
Length:463
Mass (Da):51,019
Last modified:March 6, 2013 - v1
Checksum:iD82F28D603B21822
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO203522 Genomic DNA. Translation: CCO25216.1.
RefSeqiWP_015337814.1. NZ_AUDB01000001.1.
YP_007327315.1. NC_020055.1.

Genome annotation databases

EnsemblBacteriaiCCO25216; CCO25216; DESAM_22949.
GeneIDi14423436.
KEGGidhy:DESAM_22949.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO203522 Genomic DNA. Translation: CCO25216.1.
RefSeqiWP_015337814.1. NZ_AUDB01000001.1.
YP_007327315.1. NC_020055.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCO25216; CCO25216; DESAM_22949.
GeneIDi14423436.
KEGGidhy:DESAM_22949.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Genoscope - CEA
    Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: AM13Imported.

Entry informationi

Entry nameiL0RHZ1_9DELT
AccessioniPrimary (citable) accession number: L0RHZ1
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: May 27, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.