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L0QHV1

- L0QHV1_9MYCO

UniProt

L0QHV1 - L0QHV1_9MYCO

Protein
Submitted name:

Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (Thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase)

Gene

BN42_20748

Organism
Mycobacterium canettii CIPT 140070010
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP dependent DNA ligase (ATP dependent polydeoxyribonucleotide synthase) (Thermostable DNA ligase) (ATP dependent polynucleotide ligase) (SEALase) (DNA repair enzyme) (DNA joinase)Imported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:BN42_20748Imported
    OrganismiMycobacterium canettii CIPT 140070010Imported
    Taxonomic identifieri1205674 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000010804: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    L0QHV1-1 [UniParc]FASTAAdd to Basket

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    MGSASEQRVT LTNADKVLYP ATGTTKSDIF DYYAGVAEVM LGHIAGRPAT    50
    RKRWPNGVDQ PAFFEKRLAL SAPRWLSRAT VAHRSGTTTY PIIDSATGLA 100
    WIAQQAALEV HVPQWRFVAE PGSGELNPGP ATRLVFDLDP GEGVMTAQLA 150
    EVARAVRDLL ADIGLVTFPV TSGSKGLHLY TPLDEPVSSR GATVLAKRVA 200
    QRLEQAMPAL VTSAMTKSLR AGKVFVDWSQ NSGSKTTIAP YSLRGRTHPT 250
    VAAPRTWAEL DDPALRQLSY DEVLTRIARD GDLLERLDAD APVADRLTRY 300
    RRMRDASKTP EPIPTAKPVT GDGNTFVIQE HHARRPHYDF RLERDGVLVS 350
    WAVPKNLPDT TSVNHLAIHT EDHPLEYATF EGAIPSGEYG AGKVIIWDSG 400
    TYDTEKFHDD PHTGEVIVNL HGGRISGRYA LIRTNGDRWL AHRLKNQKDQ 450
    KVFEFDNLAP MLATHGTVAG LKASQWAFEG KWDGYRLLVE ADHGAVRLRS 500
    RSGRDVTAEY PQLRALAEDL ADHHVVLDGE AVVLDSSGVP SFSQMQNRGR 550
    DTRVEFWAFD LLYLDGRSLL GTRYQDRRKL LETLANATSL TVPELLPGDG 600
    AQAFACSRKH GWEGVIAKRR DSRYQPGRRC ASWVKDKHWN TQEVVIGGWR 650
    AGEGGRSSGV GSLLMGIPGP GGLQFAGRVG TGLTERELAN LKEMLAPLHT 700
    DESPFDVPLP ARDAKGITYV KPALVAEVRY SEWTPEGRLR QSSWRGLRPD 750
    KKPSEVVRE 759
    Length:759
    Mass (Da):83,669
    Last modified:March 6, 2013 - v1
    Checksum:iFBD16A6E2362F280
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAKK01000007 Genomic DNA. Translation: CCI98657.1.
    FO203509 Genomic DNA. Translation: CCK58978.1.
    RefSeqiWP_015289428.1. NZ_CAKK01000007.1.
    YP_007263668.1. NC_019951.1.

    Genome annotation databases

    EnsemblBacteriaiCCK58978; CCK58978; BN42_20748.
    GeneIDi14364661.
    KEGGimcx:BN42_20748.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CAKK01000007 Genomic DNA. Translation: CCI98657.1 .
    FO203509 Genomic DNA. Translation: CCK58978.1 .
    RefSeqi WP_015289428.1. NZ_CAKK01000007.1.
    YP_007263668.1. NC_019951.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCK58978 ; CCK58978 ; BN42_20748 .
    GeneIDi 14364661.
    KEGGi mcx:BN42_20748.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Genoscope - CEA
      Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CIPT140070010Imported.
    2. Genoscope - CEA
      Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CIPT 140070010Imported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CIPT 140070010Imported.

    Entry informationi

    Entry nameiL0QHV1_9MYCO
    AccessioniPrimary (citable) accession number: L0QHV1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3