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L0MFP9 (L0MFP9_SERMA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. RuleBase RU000544 HAMAP-Rule MF_00124 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. SAAS SAAS020634 HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity SAAS SAAS020634 HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding9 – 168ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding87 – 904ATP By similarity HAMAP-Rule MF_00124

Sites

Active site881Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1451Zinc By similarity HAMAP-Rule MF_00124
Metal binding1471Zinc By similarity HAMAP-Rule MF_00124
Metal binding1821Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
L0MFP9 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: F5C035291A55F17E

FASTA19421,887
        10         20         30         40         50         60 
MAQLYFYYSA MNAGKSTALL QSSYNYQERG MRTLVFTAEI DHRFGVGKVS SRIGLSSQAQ 

        70         80         90        100        110        120 
LYNNDTSLYA MINQEHLQQT VHCVLVDESQ FLSKAQVEQL CDVVDQLDIP VLCYGLRTDF 

       130        140        150        160        170        180 
LGELFIGSQY LLAWADKLVE LKTICHCGRK ANMVLRLDEH GRAMQAGAQV VIGGNESYVS 

       190 
VCRKHYKEAM HTEV 

« Hide

References

[1]"Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens."
Aylward F.O., Tremmel D.M., Starrett G.J., Bruce D.C., Chain P., Chen A., Davenport K.W., Detter C., Han C.S., Han J., Huntemann M., Ivanova N.N., Kyrpides N.C., Markowitz V., Mavrommatis K., Nolan M., Pagani I., Pati A. expand/collapse author list , Pitluck S., Teshima H., Deshpande S., Goodwin L., Woyke T., Currie C.R.
Genome Announc. 1:E0023912-E0023912(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: FGI94 EMBL AGB82713.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003942 Genomic DNA. Translation: AGB82713.1.
RefSeqYP_007344898.1. NC_020064.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB82713; AGB82713; D781_2448.
GeneID14436382.
KEGGsmaf:D781_2448.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0MFP9_SERMA
AccessionPrimary (citable) accession number: L0MFP9
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)