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L0LVN0 (L0LVN0_RHITR) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:RTCIAT899_PC04845 EMBL AGB74766.1
Encoded onPlasmid pRtrCIAT899c Ref.1 EMBL AGB74766.1
OrganismRhizobium tropici CIAT 899 [Complete proteome] EMBL AGB74766.1
Taxonomic identifier698761 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

Protein attributes

Sequence length419 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Sequences

Sequence LengthMass (Da)Tools
L0LVN0 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 5A36AED6D40925CC

FASTA41945,156
        10         20         30         40         50         60 
MTITITYRIE TSGSIEAMAR KIASDQSTGT FVAVPGETEE LKARVAARVV AIHPLADAER 

        70         80         90        100        110        120 
PTWPEAGEGY GPIHRADVDI AFPLDAIGTD LAALMTIAIG GVFSIKGMTG IRIVDMKLPE 

       130        140        150        160        170        180 
AFRDAHPGPQ FGVAGSLRLT GVNGRPIIGT IVKPALGLRP EETAALVGEL IGSGADFIKD 

       190        200        210        220        230        240 
DEKLMSPAYS PLKERVEAIM PLILDHEQKT GKKVMYAFGI SHADPDEMMR NHDLVLKAGG 

       250        260        270        280        290        300 
NCAVVNINSI GFGGMNFLRK RSGLVLHAHR NGWDILTRHP GAGMDFKVYQ QFWRLLGVDQ 

       310        320        330        340        350        360 
FQINGIRVKY WEPDDSFVES FKAISTPLFD PTDCPLPVAG SGQWGGQAPE TYQRTGRTTD 

       370        380        390        400        410 
LLYLCGGGIV SHPFGPAAGV RAIQQAWQAA VSDIPLEQYA KDHPELAASI AKFSDGKDA 

« Hide

References

[1]"Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.)."
Ormeno-Orrillo E., Menna P., Almeida L.G., Ollero F.J., Nicolas M.F., Pains Rodrigues E., Shigueyoshi Nakatani A., Silva Batista J.S., Oliveira Chueire L.M., Souza R.C., Ribeiro Vasconcelos A.T., Megias M., Hungria M., Martinez-Romero E.
BMC Genomics 13:735-735(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CIAT 899 EMBL AGB74766.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004018 Genomic DNA. Translation: AGB74766.1.
RefSeqYP_007337312.1. NC_020062.1.

3D structure databases

ProteinModelPortalL0LVN0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB74766; AGB74766; RTCIAT899_PC04845.
GeneID14433479.
KEGGrtr:RTCIAT899_PC04845.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0LVN0_RHITR
AccessionPrimary (citable) accession number: L0LVN0
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)