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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

RTCIAT899_PC04845

Organism
Rhizobium tropici CIAT 899
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported
Gene namesi
ORF Names:RTCIAT899_PC04845Imported
Encoded oniPlasmid pRtrCIAT899cImported
OrganismiRhizobium tropici CIAT 899Imported
Taxonomic identifieri698761 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000010996 Componenti: Plasmid pRtrCIAT899c

Structurei

3D structure databases

ProteinModelPortaliL0LVN0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0LVN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTITITYRIE TSGSIEAMAR KIASDQSTGT FVAVPGETEE LKARVAARVV
60 70 80 90 100
AIHPLADAER PTWPEAGEGY GPIHRADVDI AFPLDAIGTD LAALMTIAIG
110 120 130 140 150
GVFSIKGMTG IRIVDMKLPE AFRDAHPGPQ FGVAGSLRLT GVNGRPIIGT
160 170 180 190 200
IVKPALGLRP EETAALVGEL IGSGADFIKD DEKLMSPAYS PLKERVEAIM
210 220 230 240 250
PLILDHEQKT GKKVMYAFGI SHADPDEMMR NHDLVLKAGG NCAVVNINSI
260 270 280 290 300
GFGGMNFLRK RSGLVLHAHR NGWDILTRHP GAGMDFKVYQ QFWRLLGVDQ
310 320 330 340 350
FQINGIRVKY WEPDDSFVES FKAISTPLFD PTDCPLPVAG SGQWGGQAPE
360 370 380 390 400
TYQRTGRTTD LLYLCGGGIV SHPFGPAAGV RAIQQAWQAA VSDIPLEQYA
410
KDHPELAASI AKFSDGKDA
Length:419
Mass (Da):45,156
Last modified:March 6, 2013 - v1
Checksum:i5A36AED6D40925CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004018 Genomic DNA. Translation: AGB74766.1.
RefSeqiWP_015342987.1. NC_020062.1.
YP_007337312.1. NC_020062.1.

Genome annotation databases

EnsemblBacteriaiAGB74766; AGB74766; RTCIAT899_PC04845.
KEGGirtr:RTCIAT899_PC04845.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004018 Genomic DNA. Translation: AGB74766.1.
RefSeqiWP_015342987.1. NC_020062.1.
YP_007337312.1. NC_020062.1.

3D structure databases

ProteinModelPortaliL0LVN0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGB74766; AGB74766; RTCIAT899_PC04845.
KEGGirtr:RTCIAT899_PC04845.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.)."
    Ormeno-Orrillo E., Menna P., Almeida L.G., Ollero F.J., Nicolas M.F., Pains Rodrigues E., Shigueyoshi Nakatani A., Silva Batista J.S., Oliveira Chueire L.M., Souza R.C., Ribeiro Vasconcelos A.T., Megias M., Hungria M., Martinez-Romero E.
    BMC Genomics 13:735-735(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIAT 899Imported.

Entry informationi

Entry nameiL0LVN0_RHITR
AccessioniPrimary (citable) accession number: L0LVN0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 24, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.