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Protein
Submitted name:

Trehalose synthase

Gene

treS

Organism
Rhizobium tropici CIAT 899
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Trehalose synthaseImported
Gene namesi
Name:treSImported
ORF Names:RTCIAT899_CH12010Imported
OrganismiRhizobium tropici CIAT 899Imported
Taxonomic identifieri698761 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
ProteomesiUP000010996 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

L0LK45-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTIDRNLRY PSWHKDAVIY QLHVKSFFDA DGDGFGDFAG LTQKLDYLAS
60 70 80 90 100
LGVNTIWLLP FYPSPRRDDG YDVLDYRGIN PQFGTIKDFT SFVKAAHARG
110 120 130 140 150
MRVITELVIN HTSDQHPWFQ RARYAPPGSP ERDFYVWSET DDKFAETRII
160 170 180 190 200
FVDSERSNWT WDPVARAYFW HRFYSHQPDL NYRNPEVVEA LLDIMRFWLK
210 220 230 240 250
AGVDGFRLDA VPYLVERENT NNENLPETHA LLKLIRNMLD AERPGVILLA
260 270 280 290 300
EANQWPDEAR EYFGTGDECH MAFHFPLMPR IFTAIAMGNA QPIITMVNQT
310 320 330 340 350
QDIPSDCQWA IFLRNHDELT LEMVSEAERN FLWNTYASDE RARLNLGIRR
360 370 380 390 400
RLSPLMDQDR RRVELLHMLL LSLPGSPVLY YGDEIGMGDN LDLGDRDGVR
410 420 430 440 450
TPMQWSNGRN GGFSDAASDK LALPVIDDAQ FGYRAINVAA QENDPHSLLN
460 470 480 490 500
WIRRVLAIRA QHPAFARGSI RFLSTDNTAV IAYAREYRND CVLFAANLAN
510 520 530 540 550
NGQAVRLDLG PFLGKTPVEL FGETKFPVVE QASYSLTFQA YGYFLLSFES

EAECFDD
Length:557
Mass (Da):63,904
Last modified:March 6, 2013 - v1
Checksum:iABA5E64B7B9FE0CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004015 Genomic DNA. Translation: AGB71783.1.
RefSeqiWP_015340480.1. NC_020059.1.

Genome annotation databases

EnsemblBacteriaiAGB71783; AGB71783; RTCIAT899_CH12010.
KEGGirtr:RTCIAT899_CH12010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004015 Genomic DNA. Translation: AGB71783.1.
RefSeqiWP_015340480.1. NC_020059.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGB71783; AGB71783; RTCIAT899_CH12010.
KEGGirtr:RTCIAT899_CH12010.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
TIGRFAMsiTIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic basis of broad host range and environmental adaptability of Rhizobium tropici CIAT 899 and Rhizobium sp. PRF 81 which are used in inoculants for common bean (Phaseolus vulgaris L.)."
    Ormeno-Orrillo E., Menna P., Almeida L.G., Ollero F.J., Nicolas M.F., Pains Rodrigues E., Shigueyoshi Nakatani A., Silva Batista J.S., Oliveira Chueire L.M., Souza R.C., Ribeiro Vasconcelos A.T., Megias M., Hungria M., Martinez-Romero E.
    BMC Genomics 13:735-735(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CIAT 899Imported.

Entry informationi

Entry nameiL0LK45_RHITR
AccessioniPrimary (citable) accession number: L0LK45
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: July 22, 2015
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.