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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

Metho_1955

Organism
Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
Ordered Locus Names:Metho_1955Imported
OrganismiMethanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1)Imported
Taxonomic identifieri867904 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanomethylovorans
Proteomesi
  • UP000010866 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliL0L1H0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 136RuBisCO_large_NInterPro annotationAdd BLAST107
Domaini149 – 363RuBisCO_largeInterPro annotationAdd BLAST215
Domaini372 – 471RuBisCO_largeInterPro annotationAdd BLAST100

Phylogenomic databases

KOiK01601.
OMAiTARRQYP.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR033966. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 2 hits.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0L1H0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPIYADLVA SLNPKQQSYV NLQLPDPYNG EYLLSVFHLV PEGKLNILQA
60 70 80 90 100
AAETAAESST GTNFKVNTET PFSKTMNALV YKLDLEQNLV WIAYPWRLFD
110 120 130 140 150
RGGNIQNILT YIVGNILGIK EIKALKLLDV WFPSSMLEQY DGPSYTLDDM
160 170 180 190 200
RKYLGVYDRP ILGTIVKPKM GLTSAEYAEV CYDFWAGGGD FVKNDEPQAN
210 220 230 240 250
QDFCPYDKMV KHVKEAMDKA VKETGRNKVH SFNVSAADFD TMIERCEMIV
260 270 280 290 300
NAGFEPGSYA FLIDGITAGW MAVQTLRRRY PGVFIHFHRA AHGAFTRPEN
310 320 330 340 350
PIGFSVLVLS KFARLAGVSG IHTGTAGVGK MKGTPEEDVV AAHGILYMRS
360 370 380 390 400
KGHFFEQTWT KIPENDKDAM HLVSEDSAHH VILEEDSWRG VKKCCPIVSG
410 420 430 440 450
GLNPIRLKPF IDVMGNVDFI TTMGSGVHAH PGGTKDGAKA LVQACDAYLN
460 470
KMDIAEYARE HSELAQAIDH FTKAQKDAM
Length:479
Mass (Da):53,203
Last modified:March 6, 2013 - v1
Checksum:iBA7412475E89F34D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003362 Genomic DNA. Translation: AGB50129.1.
RefSeqiWP_015325294.1. NC_019977.1.

Genome annotation databases

EnsemblBacteriaiAGB50129; AGB50129; Metho_1955.
GeneIDi14406468.
KEGGimhz:Metho_1955.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003362 Genomic DNA. Translation: AGB50129.1.
RefSeqiWP_015325294.1. NC_019977.1.

3D structure databases

ProteinModelPortaliL0L1H0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGB50129; AGB50129; Metho_1955.
GeneIDi14406468.
KEGGimhz:Metho_1955.

Phylogenomic databases

KOiK01601.
OMAiTARRQYP.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR033966. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 2 hits.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiL0L1H0_METHD
AccessioniPrimary (citable) accession number: L0L1H0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: November 30, 2016
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.