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L0L0G3 (L0L0G3_METHD) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Metho_1660 EMBL AGB49853.1
OrganismMethanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) [Complete proteome] [HAMAP] EMBL AGB49853.1
Taxonomic identifier867904 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanomethylovorans

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
L0L0G3 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 8FEF7D307C8BB462

FASTA42647,667
        10         20         30         40         50         60 
MLKEYIDIGY VPDETDFVCE YHLEPALRVS FEEACNHLAG ECSIGKWSDI ALLNPKLAQK 

        70         80         90        100        110        120 
LKPHVFHIDK KKHVVRVSYP QDLFEFCSVS HIISTVAGRI LNSNMISRLK LHDIIFPPDP 

       130        140        150        160        170        180 
VNELWGPKYG VGGIRDLTGV YDRPLVNAAV RPKVGLDPAT HAKVAYDLFV GGCDMVKDDE 

       190        200        210        220        230        240 
NLTDQKFNRF EKRAELTFEA REDAEEETGE KKMYMCNITA PTCEEMIRRA NFISNIGGHY 

       250        260        270        280        290        300 
VMIDAVPTGW SSVQTLRDVT EELGLAIHAQ IQGHNTFTGM EDHSISLYLI TKLARLAGLD 

       310        320        330        340        350        360 
QLYIGDIDKH FHEKKKELMA LHDCCVMDKV KGNEKMHILP QNWDGIKPMF PVVSGGYVPA 

       370        380        390        400        410        420 
LIPELMNVFD KDVIIDCNSG IYSHPMGCAA GAKSCRQVIE AVLAGVSLEE YAKSHTELQA 


AFNDKG 

« Hide

References

[1]"Complete sequence of chromosome of Methanomethylovorans hollandica DSM 15978."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Held B., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15978 / NBRC 107637 / DMS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003362 Genomic DNA. Translation: AGB49853.1.
RefSeqYP_007313383.1. NC_019977.1.

3D structure databases

ProteinModelPortalL0L0G3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB49853; AGB49853; Metho_1660.
GeneID14406173.
KEGGmhz:Metho_1660.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0L0G3_METHD
AccessionPrimary (citable) accession number: L0L0G3
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)