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L0JDK6 (L0JDK6_PREDD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding20 – 278ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding92 – 954ATP By similarity HAMAP-Rule MF_00124

Sites

Active site931Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1491Zinc By similarity HAMAP-Rule MF_00124
Metal binding1521Zinc By similarity HAMAP-Rule MF_00124
Metal binding1811Zinc By similarity HAMAP-Rule MF_00124
Metal binding1841Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
L0JDK6 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 32472F2179630795

FASTA20722,932
        10         20         30         40         50         60 
MMENLTGEAH RPGRIEVVCG SMFSGKTEEL IRRLKRAQFA RQNVEIFKPA LDTRYSEINV 

        70         80         90        100        110        120 
VSHDNNAIHS TPVDNAETIL RLSAGHEVVG IDEAQFLDDK LVEVCNAMAN KGIRVIVAGL 

       130        140        150        160        170        180 
DMDYLGVPFG PIPALCAVAD EVTKVHAICV KCGALAYASH RLVHNDAQVM LGEKMEYEPL 

       190        200 
CRSCFQKALE EDRRNAQSRS LFEHVAP 

« Hide

References

[1]"Complete sequence of chromosome 2 of Prevotella dentalis DSM 3688."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Chertkov O., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Gronow S., Wellnitz S., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003369 Genomic DNA. Translation: AGB28928.1.
RefSeqYP_007296434.1. NC_019968.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB28928; AGB28928; Prede_1623.
GeneID14388964.
KEGGpdt:Prede_1623.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0JDK6_PREDD
AccessionPrimary (citable) accession number: L0JDK6
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)