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L0J3V2

- L0J3V2_MYCSM

UniProt

L0J3V2 - L0J3V2_MYCSM

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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Mycsm_06080

Organism
Mycobacterium smegmatis JS623
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
ORF Names:Mycsm_06080Imported
OrganismiMycobacterium smegmatis JS623Imported
Taxonomic identifieri710686 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000010844: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

L0J3V2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MATPAEEIDV DGVKVRLTNP DKVYFPKLGS DGTKRKLVEY YLAVASGPML
60 70 80 90 100
TALRDRPTHL QRFPDGIEGE EIYQKRIPKH APDYLETCVV TFPSGRTADA
110 120 130 140 150
LKVTHAAAIV WAAQMGTITL HPWQVRCADT EHPDELRVDL DPQPGTAFKE
160 170 180 190 200
ARAIAVDVLK PVLDELGLVG YPKTSGGRGV HIFLRIKPDW DFIAVRRAGI
210 220 230 240 250
ALAREVQRRA PDAVTTSWWK EERGKRIFID YNQNARDRTF ASAYSARKTP
260 270 280 290 300
IATVSMPLTW DELRDADPDN YTITTAPGFV AGRDDPWEGI DSVAQSLEPL
310 320 330 340 350
MEMVKADEER GLGDLPYPPS YPKMPGEPPR VQPSKKVAAN WDDEGNPVSR
Length:350
Mass (Da):38,997
Last modified:March 6, 2013 - v1
Checksum:i27DD2627F8EB627D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003078 Genomic DNA. Translation: AGB26240.1.
RefSeqiWP_015309814.1. NC_019966.1.
YP_007295645.1. NC_019966.1.

Genome annotation databases

EnsemblBacteriaiAGB26240; AGB26240; Mycsm_06080.
GeneIDi14382734.
KEGGimsa:Mycsm_06080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003078 Genomic DNA. Translation: AGB26240.1 .
RefSeqi WP_015309814.1. NC_019966.1.
YP_007295645.1. NC_019966.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGB26240 ; AGB26240 ; Mycsm_06080 .
GeneIDi 14382734.
KEGGi msa:Mycsm_06080.

Phylogenomic databases

KOi K01971.

Family and domain databases

InterProi IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view ]
Pfami PF01896. DNA_primase_S. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Mycobacterium smegmatis JS623."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T., Holmes A.
    , Rutledge P., Paulsen I., Coleman N., Woyke T.
    Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: JS623Imported.

Entry informationi

Entry nameiL0J3V2_MYCSM
AccessioniPrimary (citable) accession number: L0J3V2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: October 1, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3