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L0J3V2

- L0J3V2_MYCSM

UniProt

L0J3V2 - L0J3V2_MYCSM

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Mycsm_06080

Organism
Mycobacterium smegmatis JS623
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA primase activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD, polymerase domain proteinImported
    Gene namesi
    ORF Names:Mycsm_06080Imported
    OrganismiMycobacterium smegmatis JS623Imported
    Taxonomic identifieri710686 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000010844: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    L0J3V2-1 [UniParc]FASTAAdd to Basket

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    MATPAEEIDV DGVKVRLTNP DKVYFPKLGS DGTKRKLVEY YLAVASGPML    50
    TALRDRPTHL QRFPDGIEGE EIYQKRIPKH APDYLETCVV TFPSGRTADA 100
    LKVTHAAAIV WAAQMGTITL HPWQVRCADT EHPDELRVDL DPQPGTAFKE 150
    ARAIAVDVLK PVLDELGLVG YPKTSGGRGV HIFLRIKPDW DFIAVRRAGI 200
    ALAREVQRRA PDAVTTSWWK EERGKRIFID YNQNARDRTF ASAYSARKTP 250
    IATVSMPLTW DELRDADPDN YTITTAPGFV AGRDDPWEGI DSVAQSLEPL 300
    MEMVKADEER GLGDLPYPPS YPKMPGEPPR VQPSKKVAAN WDDEGNPVSR 350
    Length:350
    Mass (Da):38,997
    Last modified:March 6, 2013 - v1
    Checksum:i27DD2627F8EB627D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003078 Genomic DNA. Translation: AGB26240.1.
    RefSeqiWP_015309814.1. NC_019966.1.
    YP_007295645.1. NC_019966.1.

    Genome annotation databases

    EnsemblBacteriaiAGB26240; AGB26240; Mycsm_06080.
    GeneIDi14382734.
    KEGGimsa:Mycsm_06080.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003078 Genomic DNA. Translation: AGB26240.1 .
    RefSeqi WP_015309814.1. NC_019966.1.
    YP_007295645.1. NC_019966.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGB26240 ; AGB26240 ; Mycsm_06080 .
    GeneIDi 14382734.
    KEGGi msa:Mycsm_06080.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Mycobacterium smegmatis JS623."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T., Holmes A.
      , Rutledge P., Paulsen I., Coleman N., Woyke T.
      Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: JS623Imported.

    Entry informationi

    Entry nameiL0J3V2_MYCSM
    AccessioniPrimary (citable) accession number: L0J3V2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3