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L0J3V2 (L0J3V2_MYCSM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Mycsm_06080 EMBL AGB26240.1
OrganismMycobacterium smegmatis JS623 [Complete proteome] EMBL AGB26240.1
Taxonomic identifier710686 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length350 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionDNA primase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
L0J3V2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 27DD2627F8EB627D

FASTA35038,997
        10         20         30         40         50         60 
MATPAEEIDV DGVKVRLTNP DKVYFPKLGS DGTKRKLVEY YLAVASGPML TALRDRPTHL 

        70         80         90        100        110        120 
QRFPDGIEGE EIYQKRIPKH APDYLETCVV TFPSGRTADA LKVTHAAAIV WAAQMGTITL 

       130        140        150        160        170        180 
HPWQVRCADT EHPDELRVDL DPQPGTAFKE ARAIAVDVLK PVLDELGLVG YPKTSGGRGV 

       190        200        210        220        230        240 
HIFLRIKPDW DFIAVRRAGI ALAREVQRRA PDAVTTSWWK EERGKRIFID YNQNARDRTF 

       250        260        270        280        290        300 
ASAYSARKTP IATVSMPLTW DELRDADPDN YTITTAPGFV AGRDDPWEGI DSVAQSLEPL 

       310        320        330        340        350 
MEMVKADEER GLGDLPYPPS YPKMPGEPPR VQPSKKVAAN WDDEGNPVSR 

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References

[1]"Complete sequence of chromosome of Mycobacterium smegmatis JS623."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T., Holmes A. expand/collapse author list , Rutledge P., Paulsen I., Coleman N., Woyke T.
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JS623 EMBL AGB26240.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003078 Genomic DNA. Translation: AGB26240.1.
RefSeqYP_007295645.1. NC_019966.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB26240; AGB26240; Mycsm_06080.
GeneID14382734.
KEGGmsa:Mycsm_06080.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014145. LigD_pol.
[Graphical view]
PfamPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0J3V2_MYCSM
AccessionPrimary (citable) accession number: L0J3V2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)