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L0IHR9

- L0IHR9_THETR

UniProt

L0IHR9 - L0IHR9_THETR

Protein
Submitted name:

ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein

Gene

Thethe_00683

Organism
Thermoanaerobacterium thermosaccharolyticum M0795
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family proteinImported
    Gene namesi
    ORF Names:Thethe_00683Imported
    OrganismiThermoanaerobacterium thermosaccharolyticum M0795Imported
    Taxonomic identifieri698948 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
    ProteomesiUP000010845: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    L0IHR9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSMMDEKIPP MLAVSGQVFD DPDWLYEIKW DGSRTLAFLS STTRLQDRRL    50
    VDVSHQFPEL MKLNKFIRAN EAILDGELIV LKDNKPSYRS IMMRKHQQNK 100
    LKIDFMSKSY PAIFITWDIL YVDGKELLNR PLIERKQMLN KFVNECSIMR 150
    ISDFIFEHGK TLFEETDKKR LEGVMAKKAD SKYYKGKRSS LWQKFKHYIT 200
    LNAVIIGYRT DKTALVLGLY NEENKIVHIG NVESGISQKE LTAFMKVAKD 250
    IKVKSNFYGI KESNVQWIMP VLVSKVKFME WSENFKMRAP SFLEFVYDAR 300
    PYECKFM 307
    Length:307
    Mass (Da):36,144
    Last modified:March 6, 2013 - v1
    Checksum:iBACCEABFA9926889
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003066 Genomic DNA. Translation: AGB18373.1.
    RefSeqiYP_007298070.1. NC_019970.1.

    Genome annotation databases

    EnsemblBacteriaiAGB18373; AGB18373; Thethe_00683.
    GeneIDi14390911.
    KEGGitto:Thethe_00683.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003066 Genomic DNA. Translation: AGB18373.1 .
    RefSeqi YP_007298070.1. NC_019970.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGB18373 ; AGB18373 ; Thethe_00683 .
    GeneIDi 14390911.
    KEGGi tto:Thethe_00683.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Thermoanaerobacterium thermosaccharolyticum M0795."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Feinberg L., Folden J.
      , Hogsett D., Shaw J., Woyke T.
      Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: M0795Imported.

    Entry informationi

    Entry nameiL0IHR9_THETR
    AccessioniPrimary (citable) accession number: L0IHR9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3