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L0IHR9

- L0IHR9_THETR

UniProt

L0IHR9 - L0IHR9_THETR

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Protein
Submitted name:

ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein

Gene

Thethe_00683

Organism
Thermoanaerobacterium thermosaccharolyticum M0795
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family proteinImported
Gene namesi
ORF Names:Thethe_00683Imported
OrganismiThermoanaerobacterium thermosaccharolyticum M0795Imported
Taxonomic identifieri698948 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisThermoanaerobacterium
ProteomesiUP000010845: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0IHR9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSMMDEKIPP MLAVSGQVFD DPDWLYEIKW DGSRTLAFLS STTRLQDRRL
60 70 80 90 100
VDVSHQFPEL MKLNKFIRAN EAILDGELIV LKDNKPSYRS IMMRKHQQNK
110 120 130 140 150
LKIDFMSKSY PAIFITWDIL YVDGKELLNR PLIERKQMLN KFVNECSIMR
160 170 180 190 200
ISDFIFEHGK TLFEETDKKR LEGVMAKKAD SKYYKGKRSS LWQKFKHYIT
210 220 230 240 250
LNAVIIGYRT DKTALVLGLY NEENKIVHIG NVESGISQKE LTAFMKVAKD
260 270 280 290 300
IKVKSNFYGI KESNVQWIMP VLVSKVKFME WSENFKMRAP SFLEFVYDAR

PYECKFM
Length:307
Mass (Da):36,144
Last modified:March 6, 2013 - v1
Checksum:iBACCEABFA9926889
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003066 Genomic DNA. Translation: AGB18373.1.
RefSeqiWP_015311105.1. NC_019970.1.
YP_007298070.1. NC_019970.1.

Genome annotation databases

EnsemblBacteriaiAGB18373; AGB18373; Thethe_00683.
GeneIDi14390911.
KEGGitto:Thethe_00683.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003066 Genomic DNA. Translation: AGB18373.1 .
RefSeqi WP_015311105.1. NC_019970.1.
YP_007298070.1. NC_019970.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGB18373 ; AGB18373 ; Thethe_00683 .
GeneIDi 14390911.
KEGGi tto:Thethe_00683.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Thermoanaerobacterium thermosaccharolyticum M0795."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Feinberg L., Folden J.
    , Hogsett D., Shaw J., Woyke T.
    Submitted (MAR-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: M0795Imported.

Entry informationi

Entry nameiL0IHR9_THETR
AccessioniPrimary (citable) accession number: L0IHR9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: October 29, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3