Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

4-aminobutyrate aminotransferase family protein

Gene

Halru_1791

Organism
Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferase family proteinImported
Gene namesi
Ordered Locus Names:Halru_1791Imported
OrganismiHalovivax ruber (strain DSM 18193 / JCM 13892 / XH-70)Imported
Taxonomic identifieri797302 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHalovivax
ProteomesiUP000010846 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliL0I9Y4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

KOiK00823.
OMAiMATGRPN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0I9Y4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRDTVEPSV ETMPGPRAEK WADYHHQFSA PSTYVYDFVW DTSAPATGPF
60 70 80 90 100
CTDVDGNVLL DFTSHVAAAP LGYNNPTLRK KLDEFDLPDP TKIAGQDFYV
110 120 130 140 150
SSDWPPEDSD QPGPTELMDR LTDLTSHYDM DTVFLSNSGA EAVENAIKIC
160 170 180 190 200
YTRGGHRGVT TEGAFHGRTL GALSLNRSKT VQRKGYPEIP GVISIPYPST
210 220 230 240 250
DEAYEQRWQT DGPGGNVLAD KLHPKQGVID ADELAYVILE PVQGEGGYRP
260 270 280 290 300
AHPEFARDLQ ALRERYDVAV IADEIQSGMG RTGKMWGVDH LDLTPDVITS
310 320 330 340 350
AKGLRVGATI SRSDVFPEET GRISSTWGAG DLLASFQGAL TIDIIQEQNL
360 370 380 390 400
LENVQARGRQ LRETVVDANL PGVTDVRGPG LMIGVEFDEK ERREAVVKAA
410 420 430 440 450
LERGLLTLGC GHRTVRLLPP LDVTEREIDI AADLFEAAAE AADRSVTPAA

TDGGQ
Length:455
Mass (Da):49,562
Last modified:March 6, 2013 - v1
Checksum:i0928D07C801592AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003050 Genomic DNA. Translation: AGB16390.1.
RefSeqiYP_007284523.1. NC_019964.1.

Genome annotation databases

EnsemblBacteriaiAGB16390; AGB16390; Halru_1791.
GeneIDi14377250.
KEGGihru:Halru_1791.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003050 Genomic DNA. Translation: AGB16390.1.
RefSeqiYP_007284523.1. NC_019964.1.

3D structure databases

ProteinModelPortaliL0I9Y4.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGB16390; AGB16390; Halru_1791.
GeneIDi14377250.
KEGGihru:Halru_1791.

Phylogenomic databases

KOiK00823.
OMAiMATGRPN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Halovivax ruber XH-70."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Sproer C., Anderson I., Woyke T.
    Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18193 / JCM 13892 / XH-70Imported.

Entry informationi

Entry nameiL0I9Y4_HALRX
AccessioniPrimary (citable) accession number: L0I9Y4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 29, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.