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L0I6K2

- L0I6K2_VIBPH

UniProt

L0I6K2 - L0I6K2_VIBPH

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

VPBB_A1480

Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported
    Gene namesi
    ORF Names:VPBB_A1480Imported
    OrganismiVibrio parahaemolyticus BB22OPImported
    Taxonomic identifieri1211705 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000010823: Chromosome 2

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    L0I6K2-1 [UniParc]FASTAAdd to Basket

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    MKLNLITTTL LLASASAIAE PNITISTTTN SRDFPLSAEQ PLVVPLTKDG    50
    YTLKITGVEG DCVAPDGQKV KFNKPIALNC GKPTELPLKV RFTGDYSFAY 100
    DDAAKTLLFK REPKKAAKTE FKRPIPQVQC EVYQGGEVTI ALGDSFPEGT 150
    KLRDAYSGQM VEVKEQKVSL TPSKDSGGLV LLEPVQKTKE AVPFDYRNAN 200
    IYFVMVDRFN NADASNDNSY GRKKDGKDEV GTFHGGDLKG VIEKLDYIKS 250
    LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGNE 300
    EDLKTLVEEA HKRGLKVLMD AVINHSGYST LADLQFDGID VLKPNAELPK 350
    KWGDWQPKAG ENWHSYHQNI DYQSPNWAKW WGGDWVRTGL PGYPAPGSSD 400
    ITMSLAGLPD FITESNKTVT PPQWLLNNPG TRVEARDNYT VSDYLIEWQT 450
    DWVKRFGIDG YRVDTVKHVE GEVWKRLKEE ASNSLEQWRK ENGKSGQPFW 500
    MMGEVWGHTA YRSPYFDDGF DALINFDMQK KLDKGAACFS QMADTYQSYA 550
    DTIANEKDFN PVSYMSSHDT ELFFSRFKDY GMQRNAANAL LLSPGAVQVY 600
    YGDEVGRNIG PYADDFHQGT RSDMVWKLSD DKQALLKHWQ TLGQFRQAHP 650
    AIGAGQHRVI EQEGAYVFSR SLGNDKVVVA FVGRDK 686
    Length:686
    Mass (Da):76,956
    Last modified:March 6, 2013 - v1
    Checksum:i228E50172861344D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003973 Genomic DNA. Translation: AGB12854.1.
    RefSeqiYP_007301509.1. NC_019971.1.

    Genome annotation databases

    EnsemblBacteriaiAGB12854; AGB12854; VPBB_A1480.
    GeneIDi14393762.
    KEGGivpb:VPBB_A1480.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003973 Genomic DNA. Translation: AGB12854.1 .
    RefSeqi YP_007301509.1. NC_019971.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGB12854 ; AGB12854 ; VPBB_A1480 .
    GeneIDi 14393762.
    KEGGi vpb:VPBB_A1480.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
      Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
      Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BB22OPImported.

    Entry informationi

    Entry nameiL0I6K2_VIBPH
    AccessioniPrimary (citable) accession number: L0I6K2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3