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L0I6K2 (L0I6K2_VIBPH) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:VPBB_A1480 EMBL AGB12854.1
OrganismVibrio parahaemolyticus BB22OP [Complete proteome] EMBL AGB12854.1
Taxonomic identifier1211705 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length686 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
L0I6K2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 228E50172861344D

FASTA68676,956
        10         20         30         40         50         60 
MKLNLITTTL LLASASAIAE PNITISTTTN SRDFPLSAEQ PLVVPLTKDG YTLKITGVEG 

        70         80         90        100        110        120 
DCVAPDGQKV KFNKPIALNC GKPTELPLKV RFTGDYSFAY DDAAKTLLFK REPKKAAKTE 

       130        140        150        160        170        180 
FKRPIPQVQC EVYQGGEVTI ALGDSFPEGT KLRDAYSGQM VEVKEQKVSL TPSKDSGGLV 

       190        200        210        220        230        240 
LLEPVQKTKE AVPFDYRNAN IYFVMVDRFN NADASNDNSY GRKKDGKDEV GTFHGGDLKG 

       250        260        270        280        290        300 
VIEKLDYIKS LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGNE 

       310        320        330        340        350        360 
EDLKTLVEEA HKRGLKVLMD AVINHSGYST LADLQFDGID VLKPNAELPK KWGDWQPKAG 

       370        380        390        400        410        420 
ENWHSYHQNI DYQSPNWAKW WGGDWVRTGL PGYPAPGSSD ITMSLAGLPD FITESNKTVT 

       430        440        450        460        470        480 
PPQWLLNNPG TRVEARDNYT VSDYLIEWQT DWVKRFGIDG YRVDTVKHVE GEVWKRLKEE 

       490        500        510        520        530        540 
ASNSLEQWRK ENGKSGQPFW MMGEVWGHTA YRSPYFDDGF DALINFDMQK KLDKGAACFS 

       550        560        570        580        590        600 
QMADTYQSYA DTIANEKDFN PVSYMSSHDT ELFFSRFKDY GMQRNAANAL LLSPGAVQVY 

       610        620        630        640        650        660 
YGDEVGRNIG PYADDFHQGT RSDMVWKLSD DKQALLKHWQ TLGQFRQAHP AIGAGQHRVI 

       670        680 
EQEGAYVFSR SLGNDKVVVA FVGRDK 

« Hide

References

[1]"Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BB22OP EMBL AGB12854.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003973 Genomic DNA. Translation: AGB12854.1.
RefSeqYP_007301509.1. NC_019971.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB12854; AGB12854; VPBB_A1480.
GeneID14393762.
KEGGvpb:VPBB_A1480.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0I6K2_VIBPH
AccessionPrimary (citable) accession number: L0I6K2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)