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L0I4B7

- L0I4B7_VIBPH

UniProt

L0I4B7 - L0I4B7_VIBPH

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Protein
Submitted name: Cytoplasmic alpha-amylase
Gene
VPBB_A0909
Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
ORF Names:VPBB_A0909Imported
OrganismiVibrio parahaemolyticus BB22OPImported
Taxonomic identifieri1211705 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000010823: Chromosome 2

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

L0I4B7-1 [UniParc]FASTAAdd to Basket

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MKTFKLKRTF LPLTLLLSAP AFAGQNGTMM QYFHWYVPND GALWTQVESN    50
APALAENGFT ALWLPPAYKG AGGSNDVGYG VYDMYDLGEF DQKGSVRTKY 100
GTKAQYISAI NAAHNNNIQI YGDVVFNHRG GADGKSWVDT KRVDWDNRNI 150
ELGDKWIEAW VEFNFPGRND KYSNFHWTWY HFDGVDWDDA GKEKAIFKFK 200
GEGKAWDWEV SSEKGNYDYL MYADLDMDHP EVKQELKDWG EWYINMTGVD 250
GFRMDAVKHI KYQYLQEWID HLRWKTGKEL FTVGEYWNYD VNQLHNFITK 300
TSGSMSLFDA PLHMNFYNAS KSGGNYDMRQ IMNGTLMKDN PVKAVTLVEN 350
HDTQPLQALE STVDWWFKPL AYAFILLREE GYPSVFYADY YGAQYSDKGY 400
NINMAKVPYI EEFVTLRKEY AYGKQNSYLD HWDVIGWTRE GDAEHPNSMA 450
VIMSDGPGGT KWMYTGKPST RYVDKLGIRT EDVWTDANGW AEFPVNGGSV 500
SVWVGVK 507
Length:507
Mass (Da):58,448
Last modified:March 6, 2013 - v1
Checksum:i9FBAB91DBEE70A17
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003973 Genomic DNA. Translation: AGB12283.1.
RefSeqiYP_007300938.1. NC_019971.1.

Genome annotation databases

EnsemblBacteriaiAGB12283; AGB12283; VPBB_A0909.
GeneIDi14394399.
KEGGivpb:VPBB_A0909.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003973 Genomic DNA. Translation: AGB12283.1 .
RefSeqi YP_007300938.1. NC_019971.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGB12283 ; AGB12283 ; VPBB_A0909 .
GeneIDi 14394399.
KEGGi vpb:VPBB_A0909.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
    Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
    Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BB22OPImported.

Entry informationi

Entry nameiL0I4B7_VIBPH
AccessioniPrimary (citable) accession number: L0I4B7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: September 3, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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