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L0I4B7

- L0I4B7_VIBPH

UniProt

L0I4B7 - L0I4B7_VIBPH

Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

VPBB_A0909

Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Cytoplasmic alpha-amylaseImported
    Gene namesi
    ORF Names:VPBB_A0909Imported
    OrganismiVibrio parahaemolyticus BB22OPImported
    Taxonomic identifieri1211705 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000010823: Chromosome 2

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    L0I4B7-1 [UniParc]FASTAAdd to Basket

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    MKTFKLKRTF LPLTLLLSAP AFAGQNGTMM QYFHWYVPND GALWTQVESN    50
    APALAENGFT ALWLPPAYKG AGGSNDVGYG VYDMYDLGEF DQKGSVRTKY 100
    GTKAQYISAI NAAHNNNIQI YGDVVFNHRG GADGKSWVDT KRVDWDNRNI 150
    ELGDKWIEAW VEFNFPGRND KYSNFHWTWY HFDGVDWDDA GKEKAIFKFK 200
    GEGKAWDWEV SSEKGNYDYL MYADLDMDHP EVKQELKDWG EWYINMTGVD 250
    GFRMDAVKHI KYQYLQEWID HLRWKTGKEL FTVGEYWNYD VNQLHNFITK 300
    TSGSMSLFDA PLHMNFYNAS KSGGNYDMRQ IMNGTLMKDN PVKAVTLVEN 350
    HDTQPLQALE STVDWWFKPL AYAFILLREE GYPSVFYADY YGAQYSDKGY 400
    NINMAKVPYI EEFVTLRKEY AYGKQNSYLD HWDVIGWTRE GDAEHPNSMA 450
    VIMSDGPGGT KWMYTGKPST RYVDKLGIRT EDVWTDANGW AEFPVNGGSV 500
    SVWVGVK 507
    Length:507
    Mass (Da):58,448
    Last modified:March 6, 2013 - v1
    Checksum:i9FBAB91DBEE70A17
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003973 Genomic DNA. Translation: AGB12283.1.
    RefSeqiYP_007300938.1. NC_019971.1.

    Genome annotation databases

    EnsemblBacteriaiAGB12283; AGB12283; VPBB_A0909.
    GeneIDi14394399.
    KEGGivpb:VPBB_A0909.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003973 Genomic DNA. Translation: AGB12283.1 .
    RefSeqi YP_007300938.1. NC_019971.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGB12283 ; AGB12283 ; VPBB_A0909 .
    GeneIDi 14394399.
    KEGGi vpb:VPBB_A0909.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
      Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
      Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BB22OPImported.

    Entry informationi

    Entry nameiL0I4B7_VIBPH
    AccessioniPrimary (citable) accession number: L0I4B7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3