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L0I4B7 (L0I4B7_VIBPH) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:VPBB_A0909 EMBL AGB12283.1
OrganismVibrio parahaemolyticus BB22OP [Complete proteome] EMBL AGB12283.1
Taxonomic identifier1211705 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length507 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
L0I4B7 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 9FBAB91DBEE70A17

FASTA50758,448
        10         20         30         40         50         60 
MKTFKLKRTF LPLTLLLSAP AFAGQNGTMM QYFHWYVPND GALWTQVESN APALAENGFT 

        70         80         90        100        110        120 
ALWLPPAYKG AGGSNDVGYG VYDMYDLGEF DQKGSVRTKY GTKAQYISAI NAAHNNNIQI 

       130        140        150        160        170        180 
YGDVVFNHRG GADGKSWVDT KRVDWDNRNI ELGDKWIEAW VEFNFPGRND KYSNFHWTWY 

       190        200        210        220        230        240 
HFDGVDWDDA GKEKAIFKFK GEGKAWDWEV SSEKGNYDYL MYADLDMDHP EVKQELKDWG 

       250        260        270        280        290        300 
EWYINMTGVD GFRMDAVKHI KYQYLQEWID HLRWKTGKEL FTVGEYWNYD VNQLHNFITK 

       310        320        330        340        350        360 
TSGSMSLFDA PLHMNFYNAS KSGGNYDMRQ IMNGTLMKDN PVKAVTLVEN HDTQPLQALE 

       370        380        390        400        410        420 
STVDWWFKPL AYAFILLREE GYPSVFYADY YGAQYSDKGY NINMAKVPYI EEFVTLRKEY 

       430        440        450        460        470        480 
AYGKQNSYLD HWDVIGWTRE GDAEHPNSMA VIMSDGPGGT KWMYTGKPST RYVDKLGIRT 

       490        500 
EDVWTDANGW AEFPVNGGSV SVWVGVK 

« Hide

References

[1]"Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BB22OP EMBL AGB12283.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003973 Genomic DNA. Translation: AGB12283.1.
RefSeqYP_007300938.1. NC_019971.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB12283; AGB12283; VPBB_A0909.
GeneID14394399.
KEGGvpb:VPBB_A0909.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0I4B7_VIBPH
AccessionPrimary (citable) accession number: L0I4B7
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)