Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

L0I1L5 (L0I1L5_VIBPH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length449 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
L0I1L5 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: FFCB4BFB541ECFDC

FASTA44951,387
        10         20         30         40         50         60 
MSGLQETQSA GANVILHAFD WKYADIAQRA NEIHELGYGS VLVSPPMKSA HDERWWQRYQ 

        70         80         90        100        110        120 
PQDYRVIDNA LGDTQDFIYM VRELERVGVL VYADVVFNHM ANEAHLRRDL QYPRQDVLDQ 

       130        140        150        160        170        180 
YRQDEQKYLP LKLFGDLSKP LFSEEDFVEA FGIKDWKDKW QVQNGRITGG PTDPGLPTLR 

       190        200        210        220        230        240 
VCEHVVEQQR AYLKALKAIG VKGFRIDAAK HMTLEHLKRV WTDDITQDVH IFGEIITDGG 

       250        260        270        280        290        300 
ATEEEYQLFL EPYLQETRLG AYDFPLFSTI FKAFSKKGSF KSLIDPYCFG QALSNGRAIT 

       310        320        330        340        350        360 
FVVTHDIPNN DVFLDLIMDE EDEWIAYAYI LGRDGGVPLV YTDLDTSGIK NKNGKPRWKD 

       370        380        390        400        410        420 
AWNDPRMAKM IAFHNVTHGE SMTVLEGNDD MLVLKRGEKG IVVLNKSTRA QSLSLKTECD 

       430        440 
WFDLMSDQSV KAGIELKVPA KSFMLLVQK 

« Hide

References

[1]"Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BB22OP EMBL AGB11791.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003973 Genomic DNA. Translation: AGB11791.1.
RefSeqYP_007300446.1. NC_019971.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB11791; AGB11791; VPBB_A0417.
GeneID14393830.
KEGGvpb:VPBB_A0417.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0I1L5_VIBPH
AccessionPrimary (citable) accession number: L0I1L5
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)