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L0I1L5

- L0I1L5_VIBPH

UniProt

L0I1L5 - L0I1L5_VIBPH

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Protein

Alpha-amylase

Gene
VPBB_A0417
Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:VPBB_A0417Imported
OrganismiVibrio parahaemolyticus BB22OPImported
Taxonomic identifieri1211705 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000010823: Chromosome 2

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

L0I1L5-1 [UniParc]FASTAAdd to Basket

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MSGLQETQSA GANVILHAFD WKYADIAQRA NEIHELGYGS VLVSPPMKSA    50
HDERWWQRYQ PQDYRVIDNA LGDTQDFIYM VRELERVGVL VYADVVFNHM 100
ANEAHLRRDL QYPRQDVLDQ YRQDEQKYLP LKLFGDLSKP LFSEEDFVEA 150
FGIKDWKDKW QVQNGRITGG PTDPGLPTLR VCEHVVEQQR AYLKALKAIG 200
VKGFRIDAAK HMTLEHLKRV WTDDITQDVH IFGEIITDGG ATEEEYQLFL 250
EPYLQETRLG AYDFPLFSTI FKAFSKKGSF KSLIDPYCFG QALSNGRAIT 300
FVVTHDIPNN DVFLDLIMDE EDEWIAYAYI LGRDGGVPLV YTDLDTSGIK 350
NKNGKPRWKD AWNDPRMAKM IAFHNVTHGE SMTVLEGNDD MLVLKRGEKG 400
IVVLNKSTRA QSLSLKTECD WFDLMSDQSV KAGIELKVPA KSFMLLVQK 449
Length:449
Mass (Da):51,387
Last modified:March 6, 2013 - v1
Checksum:iFFCB4BFB541ECFDC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003973 Genomic DNA. Translation: AGB11791.1.
RefSeqiWP_015312980.1. NC_019971.1.
YP_007300446.1. NC_019971.1.

Genome annotation databases

EnsemblBacteriaiAGB11791; AGB11791; VPBB_A0417.
GeneIDi14393830.
KEGGivpb:VPBB_A0417.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003973 Genomic DNA. Translation: AGB11791.1 .
RefSeqi WP_015312980.1. NC_019971.1.
YP_007300446.1. NC_019971.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGB11791 ; AGB11791 ; VPBB_A0417 .
GeneIDi 14393830.
KEGGi vpb:VPBB_A0417.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
    Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
    Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BB22OPImported.

Entry informationi

Entry nameiL0I1L5_VIBPH
AccessioniPrimary (citable) accession number: L0I1L5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: September 3, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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