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L0I1L5

- L0I1L5_VIBPH

UniProt

L0I1L5 - L0I1L5_VIBPH

Protein

Alpha-amylase

Gene

VPBB_A0417

Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 10 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:VPBB_A0417Imported
    OrganismiVibrio parahaemolyticus BB22OPImported
    Taxonomic identifieri1211705 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000010823: Chromosome 2

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    L0I1L5-1 [UniParc]FASTAAdd to Basket

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    MSGLQETQSA GANVILHAFD WKYADIAQRA NEIHELGYGS VLVSPPMKSA    50
    HDERWWQRYQ PQDYRVIDNA LGDTQDFIYM VRELERVGVL VYADVVFNHM 100
    ANEAHLRRDL QYPRQDVLDQ YRQDEQKYLP LKLFGDLSKP LFSEEDFVEA 150
    FGIKDWKDKW QVQNGRITGG PTDPGLPTLR VCEHVVEQQR AYLKALKAIG 200
    VKGFRIDAAK HMTLEHLKRV WTDDITQDVH IFGEIITDGG ATEEEYQLFL 250
    EPYLQETRLG AYDFPLFSTI FKAFSKKGSF KSLIDPYCFG QALSNGRAIT 300
    FVVTHDIPNN DVFLDLIMDE EDEWIAYAYI LGRDGGVPLV YTDLDTSGIK 350
    NKNGKPRWKD AWNDPRMAKM IAFHNVTHGE SMTVLEGNDD MLVLKRGEKG 400
    IVVLNKSTRA QSLSLKTECD WFDLMSDQSV KAGIELKVPA KSFMLLVQK 449
    Length:449
    Mass (Da):51,387
    Last modified:March 6, 2013 - v1
    Checksum:iFFCB4BFB541ECFDC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003973 Genomic DNA. Translation: AGB11791.1.
    RefSeqiWP_015312980.1. NC_019971.1.
    YP_007300446.1. NC_019971.1.

    Genome annotation databases

    EnsemblBacteriaiAGB11791; AGB11791; VPBB_A0417.
    GeneIDi14393830.
    KEGGivpb:VPBB_A0417.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003973 Genomic DNA. Translation: AGB11791.1 .
    RefSeqi WP_015312980.1. NC_019971.1.
    YP_007300446.1. NC_019971.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGB11791 ; AGB11791 ; VPBB_A0417 .
    GeneIDi 14393830.
    KEGGi vpb:VPBB_A0417.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
      Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
      Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BB22OPImported.

    Entry informationi

    Entry nameiL0I1L5_VIBPH
    AccessioniPrimary (citable) accession number: L0I1L5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3