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L0HRV9

- L0HRV9_VIBPH

UniProt

L0HRV9 - L0HRV9_VIBPH

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

VPBB_0018

Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported
    Gene namesi
    ORF Names:VPBB_0018Imported
    OrganismiVibrio parahaemolyticus BB22OPImported
    Taxonomic identifieri1211705 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000010823: Chromosome 1

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    L0HRV9-1 [UniParc]FASTAAdd to Basket

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    MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVLEPNSD GLLVAEQKLE    50
    KGNYTFTIAD SKQTCGNSFA LAEESRIKFN TPLKMDNCAT DTSMPLRIFK 100
    ANTYLFTLNP DTNELTVKIK PKQSQDITYS CPVATDTAKT INVAQTFTDG 150
    TVVRDALTGQ EATVANGSVT MQPGPMSQGL LLLEEVEQQA DKPFSWDNAT 200
    VYFVMTDRFY NGNPDNDNSY GRSKDGKYEI GTFHGGDLAG LTKKLDYIES 250
    LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTK 300
    DELRTFIDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK 350
    QVLGEKWTDW QPKSGQSWHS FNDYIKYGDS EAWEKWWGKD WIRTDIGDYD 400
    APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKNTNAQD ELKTPREHLI 450
    TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKASTSQALA EWKQNHPDKA 500
    LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL 550
    DNDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM 600
    LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ 650
    KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYQDDKVLIV YTGE 694
    Length:694
    Mass (Da):78,706
    Last modified:March 6, 2013 - v1
    Checksum:i15C6C8A7CF062990
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003972 Genomic DNA. Translation: AGB08545.1.
    RefSeqiWP_015296027.1. NC_019955.1.
    YP_007273719.1. NC_019955.1.

    Genome annotation databases

    EnsemblBacteriaiAGB08545; AGB08545; VPBB_0018.
    GeneIDi14372149.
    KEGGivpb:VPBB_0018.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003972 Genomic DNA. Translation: AGB08545.1 .
    RefSeqi WP_015296027.1. NC_019955.1.
    YP_007273719.1. NC_019955.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGB08545 ; AGB08545 ; VPBB_0018 .
    GeneIDi 14372149.
    KEGGi vpb:VPBB_0018.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
      Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
      Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BB22OPImported.

    Entry informationi

    Entry nameiL0HRV9_VIBPH
    AccessioniPrimary (citable) accession number: L0HRV9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3