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L0HRV9

- L0HRV9_VIBPH

UniProt

L0HRV9 - L0HRV9_VIBPH

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Protein
Submitted name: Periplasmic alpha-amylase
Gene
VPBB_0018
Organism
Vibrio parahaemolyticus BB22OP
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported
Gene namesi
ORF Names:VPBB_0018Imported
OrganismiVibrio parahaemolyticus BB22OPImported
Taxonomic identifieri1211705 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000010823: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

L0HRV9-1 [UniParc]FASTAAdd to Basket

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MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVLEPNSD GLLVAEQKLE    50
KGNYTFTIAD SKQTCGNSFA LAEESRIKFN TPLKMDNCAT DTSMPLRIFK 100
ANTYLFTLNP DTNELTVKIK PKQSQDITYS CPVATDTAKT INVAQTFTDG 150
TVVRDALTGQ EATVANGSVT MQPGPMSQGL LLLEEVEQQA DKPFSWDNAT 200
VYFVMTDRFY NGNPDNDNSY GRSKDGKYEI GTFHGGDLAG LTKKLDYIES 250
LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTK 300
DELRTFIDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK 350
QVLGEKWTDW QPKSGQSWHS FNDYIKYGDS EAWEKWWGKD WIRTDIGDYD 400
APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKNTNAQD ELKTPREHLI 450
TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKASTSQALA EWKQNHPDKA 500
LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL 550
DNDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM 600
LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ 650
KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYQDDKVLIV YTGE 694
Length:694
Mass (Da):78,706
Last modified:March 6, 2013 - v1
Checksum:i15C6C8A7CF062990
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003972 Genomic DNA. Translation: AGB08545.1.
RefSeqiWP_015296027.1. NC_019955.1.
YP_007273719.1. NC_019955.1.

Genome annotation databases

EnsemblBacteriaiAGB08545; AGB08545; VPBB_0018.
GeneIDi14372149.
KEGGivpb:VPBB_0018.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003972 Genomic DNA. Translation: AGB08545.1 .
RefSeqi WP_015296027.1. NC_019955.1.
YP_007273719.1. NC_019955.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGB08545 ; AGB08545 ; VPBB_0018 .
GeneIDi 14372149.
KEGGi vpb:VPBB_0018.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Prepandemic Vibrio parahaemolyticus BB22OP."
    Jensen R.V., DePasquale S.M., Harbolick E.A., Hong T., Kernell A.L., Kruchko D.H., Modise T., Smith C.E., McCarter L.L., Stevens A.M.
    Genome Announc. 1:E00002-E00012(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BB22OPImported.

Entry informationi

Entry nameiL0HRV9_VIBPH
AccessioniPrimary (citable) accession number: L0HRV9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: September 3, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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