Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

L0HEQ2 (L0HEQ2_METFS) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Metfor_2181 EMBL AGB03187.1
OrganismMethanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) [Complete proteome] [HAMAP] EMBL AGB03187.1
Taxonomic identifier593750 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanoregulaceaeMethanoregula

Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
L0HEQ2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 80EBCB6EF255B07F

FASTA43047,321
        10         20         30         40         50         60 
MAIDWYKEFV DLKYEPAKDD LVCLFYFEPA AGVSGREAAG RIASESSTGT WTTLFSMPPR 

        70         80         90        100        110        120 
MKALQATAFH IEGNVVKIAY PIELWEEGNT VQLMSGIAGN IFGMKAVRNL RLIDVALPPA 

       130        140        150        160        170        180 
YLKHFQGPHF GNDGIRKMMG IQKRPLTGAV PKPKIGFSAK EHADIGYETW MGGFDFVKDD 

       190        200        210        220        230        240 
ENLTSTSFNK FEDRVKYMTK LRDKAEKETG EKKSAFLNIT ADVETMKKRA DLLAANGWNY 

       250        260        270        280        290        300 
CMIDVVVAGT AAVMTMRDYC SDLGLAIHAH RAMHAALDRN RKHGISMQFL AKIMRLIGVS 

       310        320        330        340        350        360 
QIHTGTAVGK LTGSRKESLA LANLLREKKT AAVEGMLLEQ DWGKIKSAFP VSSGGLHPGL 

       370        380        390        400        410        420 
VPDVMDIYGP EMVLLVSGGI HGHPKGTRAG AKATMQAMEA WQEGVSLEEK AKKAKELKEA 

       430 
LGKWGHYKPI 

« Hide

References

[1]"Complete sequence of Methanoregula formicicum SMSP."
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Imachi H. expand/collapse author list , Tamaki H., Sekiguchi Y., Kamagata Y., Cadillo-Quiroz H., Zinder S., Liu W.-T., Woyke T.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 22288 / NBRC 105244 / SMSP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003167 Genomic DNA. Translation: AGB03187.1.
RefSeqYP_007249694.1. NC_019943.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGB03187; AGB03187; Metfor_2181.
GeneID14309573.
KEGGmfo:Metfor_2181.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR017712. RuBisCO_III.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsTIGR03326. rubisco_III. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0HEQ2_METFS
AccessionPrimary (citable) accession number: L0HEQ2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)