Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

Thimo_2947

Organism
Thioflavicoccus mobilis 8321
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
ORF Names:Thimo_2947Imported
OrganismiThioflavicoccus mobilis 8321Imported
Taxonomic identifieri765912 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThioflavicoccus
Proteomesi
  • UP000010816 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliL0H228.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 137121RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini147 – 455309RuBisCO_largeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

L0H228-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAKTYDAGV KEYRDMYWTP EYVPLDTDLL ACFKCTGQPG VPREEVAAAV
60 70 80 90 100
AAESSTGTWS TVWSELLTDL EYYKGRAYRI EDVPGDKESF YAFVAYPIDL
110 120 130 140 150
FEEGSVVNVL TSLVGNVFGF KALRHLRLED IRFPIAYIKT CNGPPAGIQV
160 170 180 190 200
ERDRLNKYAR PLLGCTIKPK LGLSAKNYGR AVYECLRGGL DLTKDDENVN
210 220 230 240 250
SQPFMRWRDR FEFVGEAIQK SQQETGERKG HYLNVTAPDP EQMYERAEFA
260 270 280 290 300
KEVGCPIIMH DFLTGGFTAN TGLAKWCRKN GMLLHIHRAM HAVIDRHPKH
310 320 330 340 350
GIHFRVLAKC LRLSGGDHLH TGTVVGKLEG DRASTLGYVD QLRESFVPED
360 370 380 390 400
RSRGVFFDQD WGSMPGVFAV ASGGIHVWHM PALVTIFGDD SVLQFGGGTQ
410 420 430 440 450
GHPWGNAAGA AANRVALEAC IKARNQGRGL EKESRDILTE AARHSPELAM
460 470
AMETWKEIKF EFETVDKLDV A
Length:471
Mass (Da):52,517
Last modified:March 6, 2013 - v1
Checksum:i88447B6AE24F2CFC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003051 Genomic DNA. Translation: AGA91639.1.
RefSeqiWP_015281770.1. NC_019940.1.

Genome annotation databases

EnsemblBacteriaiAGA91639; AGA91639; Thimo_2947.
KEGGitmb:Thimo_2947.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003051 Genomic DNA. Translation: AGA91639.1.
RefSeqiWP_015281770.1. NC_019940.1.

3D structure databases

ProteinModelPortaliL0H228.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGA91639; AGA91639; Thimo_2947.
KEGGitmb:Thimo_2947.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Thioflavicoccus mobilis 8321."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K.
    , Liu Z., Imhoff J., Thiel V., Frigaard N.-U., Bryant D., Woyke T.
    Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 8321Imported.

Entry informationi

Entry nameiL0H228_9GAMM
AccessioniPrimary (citable) accession number: L0H228
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 13, 2016
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.