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L0H1R4 (L0H1R4_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Thimo_2808 EMBL AGA91514.1
OrganismThioflavicoccus mobilis 8321 EMBL AGA91514.1
Taxonomic identifier765912 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThioflavicoccus

Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Sequences

Sequence LengthMass (Da)Tools
L0H1R4 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: C8F9D70DC5F84E2B

FASTA38440,343
        10         20         30         40         50         60 
MTGDPTLSLS GERLAAVYRL ACGPAEVGAR ARAICVEQTV EFPADLVDDP AIQAQIIGEV 

        70         80         90        100        110        120 
ASIEPIAPGR FEVVIRYPVE AAGRELTQLV NLLFGNVSLQ PGVRLQGFTL PGSLLRHYRG 

       130        140        150        160        170        180 
PRFGTPGLRD LVGVQDRPLL CTALKPMGRS PEQLAALAYR LALGGIDLIK DDHGLADQSF 

       190        200        210        220        230        240 
CPFAERVACC TEAVAQANRE TGSRSLYLPN ITAPTDEIAG RARRAKAAGA GGLLVCPGLI 

       250        260        270        280        290        300 
GFDGVRALAD DEALALPILS HPAFQGGYCV NPDAGLGHGV LFGQLNRLTG ADAAIFPHWG 

       310        320        330        340        350        360 
GRFAFTQAEC RDLVAGATCS MGAIRPILPV PAGGLRLERV TELCDFYGRD CILLIGGDLH 

       370        380 
AQGADLVTTC RRFVTLAQAN GAAG 

« Hide

References

[1]"Complete sequence of chromosome of Thioflavicoccus mobilis 8321."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K. expand/collapse author list , Liu Z., Imhoff J., Thiel V., Frigaard N.-U., Bryant D., Woyke T.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 8321 EMBL AGA91514.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003051 Genomic DNA. Translation: AGA91514.1.
RefSeqYP_007245144.1. NC_019940.1.

3D structure databases

ProteinModelPortalL0H1R4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA91514; AGA91514; Thimo_2808.
GeneID14305070.
KEGGtmb:Thimo_2808.

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0H1R4_9GAMM
AccessionPrimary (citable) accession number: L0H1R4
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)