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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

Thimo_3339

Organism
Thioflavicoccus mobilis 8321
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
ORF Names:Thimo_3339Imported
OrganismiThioflavicoccus mobilis 8321Imported
Taxonomic identifieri765912 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThioflavicoccus
ProteomesiUP000010816 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliL0H1D5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0H1D5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALDQSARYA DLSLKEIDLI DGGKHILCAY RMKPKGGYSY LEAAAHFAAE
60 70 80 90 100
SSTGTNVEVC TTDDFTKGVD ALVYSIDEAR EEMRIAYPLD LFDRNMTDGR
110 120 130 140 150
MMLVSFLTLT IGNNQGMGDI EYAKMIDFWM PPRAIQLFDG PSKNISDLWR
160 170 180 190 200
ILGRPVQDGG YIAGTIIKPK LGLRPEPFAQ AAYQFWLGGD FIKNDEPQGN
210 220 230 240 250
QTFAPVKKVM PLVYDAMKRA QDETGEAKLF SMNITADDHF EMCARADFAL
260 270 280 290 300
ETFGSDADKL AFLVDGFVGG PGMVTTARRQ YPDQYLHYHR AGHGMITSPS
310 320 330 340 350
SNRGYTAFVL AKMARLQGAS GIHVGTMGYG KMEGGADDRV IAYMIERDAC
360 370 380 390 400
EGPVYYQEWY GMKPTTPIIS GGMNALRLPG FFQNLGHGNI INTAGGGSYG
410 420 430 440 450
HLDSPAAGAK SLRQAYECWK SGADPIEFAK EHKEFARAFA SFPHDADKLF
460
PGWREKLGSF ALEA
Length:464
Mass (Da):51,119
Last modified:March 6, 2013 - v1
Checksum:i2C871768CBC07A7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003051 Genomic DNA. Translation: AGA92011.1.
RefSeqiWP_015282139.1. NC_019940.1.

Genome annotation databases

EnsemblBacteriaiAGA92011; AGA92011; Thimo_3339.
KEGGitmb:Thimo_3339.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003051 Genomic DNA. Translation: AGA92011.1.
RefSeqiWP_015282139.1. NC_019940.1.

3D structure databases

ProteinModelPortaliL0H1D5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGA92011; AGA92011; Thimo_3339.
KEGGitmb:Thimo_3339.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01339. RuBisCO_L_type2.
InterProiIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Thioflavicoccus mobilis 8321."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K.
    , Liu Z., Imhoff J., Thiel V., Frigaard N.-U., Bryant D., Woyke T.
    Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 8321Imported.

Entry informationi

Entry nameiL0H1D5_9GAMM
AccessioniPrimary (citable) accession number: L0H1D5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: July 22, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.