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L0H1D5 (L0H1D5_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Thimo_3339 EMBL AGA92011.1
OrganismThioflavicoccus mobilis 8321 [Complete proteome] EMBL AGA92011.1
Taxonomic identifier765912 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThioflavicoccus

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Sequences

Sequence LengthMass (Da)Tools
L0H1D5 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 2C871768CBC07A7B

FASTA46451,119
        10         20         30         40         50         60 
MALDQSARYA DLSLKEIDLI DGGKHILCAY RMKPKGGYSY LEAAAHFAAE SSTGTNVEVC 

        70         80         90        100        110        120 
TTDDFTKGVD ALVYSIDEAR EEMRIAYPLD LFDRNMTDGR MMLVSFLTLT IGNNQGMGDI 

       130        140        150        160        170        180 
EYAKMIDFWM PPRAIQLFDG PSKNISDLWR ILGRPVQDGG YIAGTIIKPK LGLRPEPFAQ 

       190        200        210        220        230        240 
AAYQFWLGGD FIKNDEPQGN QTFAPVKKVM PLVYDAMKRA QDETGEAKLF SMNITADDHF 

       250        260        270        280        290        300 
EMCARADFAL ETFGSDADKL AFLVDGFVGG PGMVTTARRQ YPDQYLHYHR AGHGMITSPS 

       310        320        330        340        350        360 
SNRGYTAFVL AKMARLQGAS GIHVGTMGYG KMEGGADDRV IAYMIERDAC EGPVYYQEWY 

       370        380        390        400        410        420 
GMKPTTPIIS GGMNALRLPG FFQNLGHGNI INTAGGGSYG HLDSPAAGAK SLRQAYECWK 

       430        440        450        460 
SGADPIEFAK EHKEFARAFA SFPHDADKLF PGWREKLGSF ALEA 

« Hide

References

[1]"Complete sequence of chromosome of Thioflavicoccus mobilis 8321."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K. expand/collapse author list , Liu Z., Imhoff J., Thiel V., Frigaard N.-U., Bryant D., Woyke T.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 8321 EMBL AGA92011.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003051 Genomic DNA. Translation: AGA92011.1.
RefSeqYP_007245641.1. NC_019940.1.

3D structure databases

ProteinModelPortalL0H1D5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA92011; AGA92011; Thimo_3339.
GeneID14305599.
KEGGtmb:Thimo_3339.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01339. RuBisCO_L_type2.
InterProIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0H1D5_9GAMM
AccessionPrimary (citable) accession number: L0H1D5
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)