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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene

Thimo_0765

Organism
Thioflavicoccus mobilis 8321
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase, large subunitImported
Gene namesi
ORF Names:Thimo_0765Imported
OrganismiThioflavicoccus mobilis 8321Imported
Taxonomic identifieri765912 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThioflavicoccus
ProteomesiUP000010816 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliL0GWD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini16 – 136121RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini146 – 454309RuBisCO_largeInterPro annotationAdd
BLAST

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

L0GWD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKTYNAGVK DYRETYWMPD YTPKDTDILA CFKITPQPGV PREEAAAAVA
60 70 80 90 100
AESSTGTWTT VWTDLLTDLD YYKGRAYAIE DVPGDDERFY AFIAYPIDLF
110 120 130 140 150
EEGSVVNVFT SLVGNVFGFK AVRTLRLEDV RFPIAYVMTC NGPPHGIQVE
160 170 180 190 200
RDIMNKYGRP LLGCTIKPKL GLSAKNYGRA VYECLRGGLD FTKDDENVNS
210 220 230 240 250
QPFMRWRQRF DFVMEAIDKA ESETGERKGH YLNVTAPTPD EMFKRAEHAK
260 270 280 290 300
ELGAPIIMHD YITGGWCANT GLAQWCRDNG VLLHIHRAMH AVIDRHPHHG
310 320 330 340 350
IHFRVLAKLL RLSGGDHLHT GTVVGKLEGD RAATLGWIDL LRESYVEEDR
360 370 380 390 400
SRGIFFDQDW GSMPGVFAVA SGGIHVWHMP ALVTIFGDDA VLQFGGGTLG
410 420 430 440 450
HPWGNAAGAA ANRVALEACV EARNRGVAIE KEGKEVLTAA ANNSPELKAA
460 470
METWKEIKFE FDTVDKLDVA HK
Length:472
Mass (Da):52,514
Last modified:March 6, 2013 - v1
Checksum:i265A348FD4ADD3DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003051 Genomic DNA. Translation: AGA89604.1.
RefSeqiWP_015279751.1. NC_019940.1.

Genome annotation databases

EnsemblBacteriaiAGA89604; AGA89604; Thimo_0765.
KEGGitmb:Thimo_0765.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003051 Genomic DNA. Translation: AGA89604.1.
RefSeqiWP_015279751.1. NC_019940.1.

3D structure databases

ProteinModelPortaliL0GWD2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGA89604; AGA89604; Thimo_0765.
KEGGitmb:Thimo_0765.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Thioflavicoccus mobilis 8321."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K.
    , Liu Z., Imhoff J., Thiel V., Frigaard N.-U., Bryant D., Woyke T.
    Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 8321Imported.

Entry informationi

Entry nameiL0GWD2_9GAMM
AccessioniPrimary (citable) accession number: L0GWD2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: December 9, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.