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L0GSI2 (L0GSI2_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Thimo_0884 EMBL AGA89718.1
OrganismThioflavicoccus mobilis 8321 [Complete proteome] EMBL AGA89718.1
Taxonomic identifier765912 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeThioflavicoccus

Protein attributes

Sequence length435 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
L0GSI2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 5DFF3B1AB2FB0AC8

FASTA43547,376
        10         20         30         40         50         60 
MTPDDLSGFF VDPATLRRDE HILLDYSFEC VGDPREAAAH LCSEQSTAQW RRIGVDEDFR 

        70         80         90        100        110        120 
PRFAAKVLDL QVEGRLDGFS YPIPASTAPT GEVRACRVRI AHPHANFGPR IPNLLSAVCG 

       130        140        150        160        170        180 
EGPFFCPGIP ILKLLDIHFP DAYLSQFEGP KFGIDGLRER LQAYDRPIFF GVIKPNIGLP 

       190        200        210        220        230        240 
PEPFCEAGYQ SWLGGLDIAK DDEMLADPDW SPLAERTALL GAARQRAERE TGTPKIYLAN 

       250        260        270        280        290        300 
ITDEVDRLLE LHDTAVANGA NALLLNALPV GLSAARMVRR HTQVPLIAHF PFIAAFSRLE 

       310        320        330        340        350        360 
HYGVHARVMT KLQRLAGFDA IIMPGFGPRM FTPEEEVMQC VDACLADMGP IRRSLPVPGG 

       370        380        390        400        410        420 
SDWAGTLAGV HARIGSADFG FVPGRGVFGH PHGPRGGAAS VRQAWDAIAR GIPLAEHARH 

       430 
HPELQAALDA FGAKG 

« Hide

References

[1]"Complete sequence of chromosome of Thioflavicoccus mobilis 8321."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Vogl K. expand/collapse author list , Liu Z., Imhoff J., Thiel V., Frigaard N.-U., Bryant D., Woyke T.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 8321 EMBL AGA89718.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003051 Genomic DNA. Translation: AGA89718.1.
RefSeqYP_007243348.1. NC_019940.1.

3D structure databases

ProteinModelPortalL0GSI2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA89718; AGA89718; Thimo_0884.
GeneID14303148.
KEGGtmb:Thimo_0884.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0GSI2_9GAMM
AccessionPrimary (citable) accession number: L0GSI2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)