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L0GJ82 (L0GJ82_PSEST) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length690 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL AGA85455.1
Chain24 – 690667 Potential EMBL AGA85455.1
PRO_5001092315

Sequences

Sequence LengthMass (Da)Tools
L0GJ82 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 32A63DD920083BF4

FASTA69075,784
        10         20         30         40         50         60 
MRAHRLSVLP LLFGLALPLS GLAAPELSVR LNDQPLSPSW NALAADRYDA ELELEPGRLH 

        70         80         90        100        110        120 
LVMPQAGVEN TALAPFRRQP LGKDSAYRYE VPEAGRYRLI VETGTAAALR LLPIKAAEQK 

       130        140        150        160        170        180 
AAAPVCRAWD GGAVEVAVGD VFRDGQTLRD ALSGATAIVR NGQVTLQPAA GSDGLLLLEA 

       190        200        210        220        230        240 
AEPAGAAPSR NWRNATVYFV LTDRFANGDP SNDRSYGREL DGADEIGTFH GGDLKGLTER 

       250        260        270        280        290        300 
LDHIASLGVD ALWISAPYEQ IHGWVGGGDS GDFRHYGYHG YYALDFTQLD ANMGSEDDLR 

       310        320        330        340        350        360 
TLIRAAHARG IRVLFDVVMN HPGYSTLQDM QQQGFGALRD GMADYLPEQW STWQPEAHEN 

       370        380        390        400        410        420 
LHAYHNLVDY EHPSWAAWWG RDWVRAGIAD YDTPPSSTVD PLKGSLAFLP DFRTESEAVV 

       430        440        450        460        470        480 
ALPEFLAHKA QTRAVPREGY RVRDYLIEWL TLWVRDFGVD GFRVDTVKHV EPSTWAELRA 

       490        500        510        520        530        540 
AAERARADWA RANPDDPMTS EPFWMVGEVF AHGPQASDYL GQGFDALINF DFQAQTVAAS 

       550        560        570        580        590        600 
DCLAAAEPSY ADYARRLGET PGHNLLSYAS SHDTALFNQL AKGDLTRQRG LAAALLLAPG 

       610        620        630        640        650        660 
AVQVYYGDES ARAFGPTGSD PYQGTRSPMN WAEHERPEIA ALIEHWQRIG QFRARHPAIG 

       670        680        690 
AGEHRLLSAG QPYAFARTLG EDKVIVVQAR 

« Hide

References

[1]"Complete sequence of chromosome of Pseudomonas stutzeri RCH2."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Zeytun A., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I. expand/collapse author list , Chakraborty R., Arkin A., Dehal P., Wall J., Hazen T., Woyke T.
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: RCH2 EMBL AGA85455.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003071 Genomic DNA. Translation: AGA85455.1.
RefSeqYP_007239085.1. NC_019936.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA85455; AGA85455; Psest_0862.
GeneID14298717.
KEGGpsh:Psest_0862.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0GJ82_PSEST
AccessionPrimary (citable) accession number: L0GJ82
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)