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Protein
Submitted name:

Glycosidase

Gene

Psest_0862

Organism
Pseudomonas stutzeri RCH2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
GlycosidaseImported
Gene namesi
ORF Names:Psest_0862Imported
OrganismiPseudomonas stutzeri RCH2Imported
Taxonomic identifieri644801 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000010820 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323 PotentialImportedAdd
BLAST
Chaini24 – 690667 PotentialImportedPRO_5001092315Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

L0GJ82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAHRLSVLP LLFGLALPLS GLAAPELSVR LNDQPLSPSW NALAADRYDA
60 70 80 90 100
ELELEPGRLH LVMPQAGVEN TALAPFRRQP LGKDSAYRYE VPEAGRYRLI
110 120 130 140 150
VETGTAAALR LLPIKAAEQK AAAPVCRAWD GGAVEVAVGD VFRDGQTLRD
160 170 180 190 200
ALSGATAIVR NGQVTLQPAA GSDGLLLLEA AEPAGAAPSR NWRNATVYFV
210 220 230 240 250
LTDRFANGDP SNDRSYGREL DGADEIGTFH GGDLKGLTER LDHIASLGVD
260 270 280 290 300
ALWISAPYEQ IHGWVGGGDS GDFRHYGYHG YYALDFTQLD ANMGSEDDLR
310 320 330 340 350
TLIRAAHARG IRVLFDVVMN HPGYSTLQDM QQQGFGALRD GMADYLPEQW
360 370 380 390 400
STWQPEAHEN LHAYHNLVDY EHPSWAAWWG RDWVRAGIAD YDTPPSSTVD
410 420 430 440 450
PLKGSLAFLP DFRTESEAVV ALPEFLAHKA QTRAVPREGY RVRDYLIEWL
460 470 480 490 500
TLWVRDFGVD GFRVDTVKHV EPSTWAELRA AAERARADWA RANPDDPMTS
510 520 530 540 550
EPFWMVGEVF AHGPQASDYL GQGFDALINF DFQAQTVAAS DCLAAAEPSY
560 570 580 590 600
ADYARRLGET PGHNLLSYAS SHDTALFNQL AKGDLTRQRG LAAALLLAPG
610 620 630 640 650
AVQVYYGDES ARAFGPTGSD PYQGTRSPMN WAEHERPEIA ALIEHWQRIG
660 670 680 690
QFRARHPAIG AGEHRLLSAG QPYAFARTLG EDKVIVVQAR
Length:690
Mass (Da):75,784
Last modified:March 6, 2013 - v1
Checksum:i32A63DD920083BF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003071 Genomic DNA. Translation: AGA85455.1.
RefSeqiWP_015275798.1. NC_019936.1.
YP_007239085.1. NC_019936.1.

Genome annotation databases

EnsemblBacteriaiAGA85455; AGA85455; Psest_0862.
KEGGipsh:Psest_0862.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003071 Genomic DNA. Translation: AGA85455.1.
RefSeqiWP_015275798.1. NC_019936.1.
YP_007239085.1. NC_019936.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGA85455; AGA85455; Psest_0862.
KEGGipsh:Psest_0862.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Pseudomonas stutzeri RCH2."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Zeytun A., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I.
    , Chakraborty R., Arkin A., Dehal P., Wall J., Hazen T., Woyke T.
    Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RCH2Imported.

Entry informationi

Entry nameiL0GJ82_PSEST
AccessioniPrimary (citable) accession number: L0GJ82
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 1, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.