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L0GIM8 (L0GIM8_PSEST) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Psest_0667 EMBL AGA85265.1
OrganismPseudomonas stutzeri RCH2 [Complete proteome] EMBL AGA85265.1
Taxonomic identifier644801 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length517 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AGA85265.1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL AGA85265.1
Chain33 – 517485 Potential EMBL AGA85265.1
PRO_5001092256

Sequences

Sequence LengthMass (Da)Tools
L0GIM8 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: DDE6BAA852B22DC7

FASTA51758,520
        10         20         30         40         50         60 
MSAPDQKRRQ LLQGIGAGLA LPALGVAPAI IAAPRERPQM LDGVQSGDVA GDRALIWSRC 

        70         80         90        100        110        120 
DRPGRLIVEW DTRSRFGNPR RMVSSITDAG QDFTARVDLR GLPADQSIFY RARFEDARSG 

       130        140        150        160        170        180 
MLSEPWFGHL RSAPTRPRDI RFVWGGDTCG QGYGINPDFG GMRIYESMRM RRPDFFLHSG 

       190        200        210        220        230        240 
DVIYADGPIP AEVTAEDGSI WRNLVTEEKS KVAETLNEFR GNYRYNLLDE NLRAFNAEVP 

       250        260        270        280        290        300 
QIWQWDDHEV TNNWSPSKQL DDRYQQVRDI DTLVQRARQA YLEYAPMRMA RGDTQGRIYR 

       310        320        330        340        350        360 
KVSYGPLLDV FVLDMRSYRG PNTHNLQTEQ GADTVFLGRE QLRWLKRELR ASRATWKVIA 

       370        380        390        400        410        420 
ADMPIGLHVP DGPRWEAIAN GHDGEALGRE LEIAELLTFI QRARVRNTVW LTADVHYCAA 

       430        440        450        460        470        480 
HYYHPNRAAY QQFEPFWEFV AGPLNAGSFG PNPLDGTFGP EVVFQKAPPT ANSSPRAGFQ 

       490        500        510 
FFGEVEIDAQ TAALQVSLRD IDGTVVYSQT LEPWQQA 

« Hide

References

[1]"Complete sequence of chromosome of Pseudomonas stutzeri RCH2."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Zeytun A., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I. expand/collapse author list , Chakraborty R., Arkin A., Dehal P., Wall J., Hazen T., Woyke T.
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: RCH2 EMBL AGA85265.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003071 Genomic DNA. Translation: AGA85265.1.
RefSeqYP_007238895.1. NC_019936.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA85265; AGA85265; Psest_0667.
GeneID14298522.
KEGGpsh:Psest_0667.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01113.

Family and domain databases

Gene3D3.60.21.10. 1 hit.
InterProIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamPF09423. PhoD. 1 hit.
[Graphical view]
SUPFAMSSF56300. SSF56300. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0GIM8_PSEST
AccessionPrimary (citable) accession number: L0GIM8
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)