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Protein
Submitted name:

Phosphodiesterase/alkaline phosphatase D

Gene

Psest_0667

Organism
Pseudomonas stutzeri RCH2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphodiesterase/alkaline phosphatase DImported
Gene namesi
ORF Names:Psest_0667Imported
OrganismiPseudomonas stutzeri RCH2Imported
Taxonomic identifieri644801 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000010820 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232 PotentialImportedAdd
BLAST
Chaini33 – 517485 PotentialImportedPRO_5001092256Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK01113.

Family and domain databases

Gene3Di3.60.21.10. 1 hit.
InterProiIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF09423. PhoD. 1 hit.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

L0GIM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAPDQKRRQ LLQGIGAGLA LPALGVAPAI IAAPRERPQM LDGVQSGDVA
60 70 80 90 100
GDRALIWSRC DRPGRLIVEW DTRSRFGNPR RMVSSITDAG QDFTARVDLR
110 120 130 140 150
GLPADQSIFY RARFEDARSG MLSEPWFGHL RSAPTRPRDI RFVWGGDTCG
160 170 180 190 200
QGYGINPDFG GMRIYESMRM RRPDFFLHSG DVIYADGPIP AEVTAEDGSI
210 220 230 240 250
WRNLVTEEKS KVAETLNEFR GNYRYNLLDE NLRAFNAEVP QIWQWDDHEV
260 270 280 290 300
TNNWSPSKQL DDRYQQVRDI DTLVQRARQA YLEYAPMRMA RGDTQGRIYR
310 320 330 340 350
KVSYGPLLDV FVLDMRSYRG PNTHNLQTEQ GADTVFLGRE QLRWLKRELR
360 370 380 390 400
ASRATWKVIA ADMPIGLHVP DGPRWEAIAN GHDGEALGRE LEIAELLTFI
410 420 430 440 450
QRARVRNTVW LTADVHYCAA HYYHPNRAAY QQFEPFWEFV AGPLNAGSFG
460 470 480 490 500
PNPLDGTFGP EVVFQKAPPT ANSSPRAGFQ FFGEVEIDAQ TAALQVSLRD
510
IDGTVVYSQT LEPWQQA
Length:517
Mass (Da):58,520
Last modified:March 6, 2013 - v1
Checksum:iDDE6BAA852B22DC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003071 Genomic DNA. Translation: AGA85265.1.
RefSeqiYP_007238895.1. NC_019936.1.

Genome annotation databases

EnsemblBacteriaiAGA85265; AGA85265; Psest_0667.
KEGGipsh:Psest_0667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003071 Genomic DNA. Translation: AGA85265.1.
RefSeqiYP_007238895.1. NC_019936.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGA85265; AGA85265; Psest_0667.
KEGGipsh:Psest_0667.

Phylogenomic databases

KOiK01113.

Family and domain databases

Gene3Di3.60.21.10. 1 hit.
InterProiIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF09423. PhoD. 1 hit.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Pseudomonas stutzeri RCH2."
    US DOE Joint Genome Institute
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Zeytun A., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I.
    , Chakraborty R., Arkin A., Dehal P., Wall J., Hazen T., Woyke T.
    Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: RCH2Imported.

Entry informationi

Entry nameiL0GIM8_PSEST
AccessioniPrimary (citable) accession number: L0GIM8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 29, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.