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L0GFC6

- L0GFC6_PSEST

UniProt

L0GFC6 - L0GFC6_PSEST

Protein
Submitted name:

Glycosidase

Gene

Psest_0860

Organism
Pseudomonas stutzeri RCH2
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (06 Mar 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    GlycosidaseImported
    Gene namesi
    ORF Names:Psest_0860Imported
    OrganismiPseudomonas stutzeri RCH2Imported
    Taxonomic identifieri644801 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000010820: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2121 PotentialImportedAdd
    BLAST
    Chaini22 – 548527 PotentialImportedPRO_5001092000Add
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015165. DUF1921.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF00686. CBM_20. 1 hit.
    PF09081. DUF1921. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    L0GFC6-1 [UniParc]FASTAAdd to Basket

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    MSHILRAAAL AAILLPLPAL ADQAGKSPNA VRYHGGDEII LQGFHWNVVR    50
    EAPNNWYNIL RQQASTIAAD GFSAIWMPVP WRDFSSWSEG GKSGGGEGYF 100
    WHDFNKNGRY GSDTQLRQAA GALGGAGVKV LYDVVPNHMN RGYPNKEINL 150
    PAGQGFWRND CADPGNYPND CDDGDRFVGG DADLNTGHPQ VYGMFRDEFA 200
    NLRSQYGAGG FRFDFVRGFA PERVNSWMTD SADNSFCVGE LWKGPSEYPS 250
    WDWRNTASWQ QIIKDWSDRA KCPVFDFALK ERMQNGSIAD WKNGLNGNPD 300
    PRWREVAVTF VDNHDTGYSP GQNGGQHHWA LQDGLIRQAY AYILTSPGTP 350
    VVYWSHMYDW GYGDFIRQLI QVRRTAGVRA DSAISFHSGY SGLVATVSGT 400
    QQTLVVALNS NLSNPGQVAS ASFSEAVNAS NGQVRVWRSG TGSGGGEPGA 450
    LVKVNFRCDN GVTQPGDSVY AAGSVGQLGN WSPASAVRLT DTSGYPTWKG 500
    SISLPAGQNV EWKCLIRNEA NATLVRQWQG GANNSLTPSE GATTVGRL 548
    Length:548
    Mass (Da):59,721
    Last modified:March 6, 2013 - v1
    Checksum:i279383756F308082
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003071 Genomic DNA. Translation: AGA85453.1.
    RefSeqiYP_007239083.1. NC_019936.1.

    Genome annotation databases

    EnsemblBacteriaiAGA85453; AGA85453; Psest_0860.
    GeneIDi14298715.
    KEGGipsh:Psest_0860.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003071 Genomic DNA. Translation: AGA85453.1 .
    RefSeqi YP_007239083.1. NC_019936.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGA85453 ; AGA85453 ; Psest_0860 .
    GeneIDi 14298715.
    KEGGi psh:Psest_0860.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015165. DUF1921.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF00686. CBM_20. 1 hit.
    PF09081. DUF1921. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Pseudomonas stutzeri RCH2."
      US DOE Joint Genome Institute
      Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Zeytun A., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I.
      , Chakraborty R., Arkin A., Dehal P., Wall J., Hazen T., Woyke T.
      Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: RCH2Imported.

    Entry informationi

    Entry nameiL0GFC6_PSEST
    AccessioniPrimary (citable) accession number: L0GFC6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3