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L0G4S7 (L0G4S7_ECHVK) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Echvi_4341 EMBL AGA80527.1
OrganismEchinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) [Complete proteome] [HAMAP] EMBL AGA80527.1
Taxonomic identifier926556 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeEchinicola

Protein attributes

Sequence length508 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AGA80527.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpathogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1818 Potential EMBL AGA80527.1
Chain19 – 508490 Potential EMBL AGA80527.1
PRO_5001091758

Sequences

Sequence LengthMass (Da)Tools
L0G4S7 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 3B0DFE1BA10E813C

FASTA50855,311
        10         20         30         40         50         60 
MGSLLIMMVN CTSRPTGAAD VVQVTVNQHT VPVIKGQNND VLSMEFTLKE GDVLEQISLA 

        70         80         90        100        110        120 
TDGAEELEAL TVYELEKGTG GNKEPIAALV RVGEKAVVNM DRPLSPGDHK LVVGIQPKKS 

       130        140        150        160        170        180 
ASLKKTLQIG IKDISFGNSG AAIAKQSGSM PLRLATSLRN AGDDGVAAYR IPGLATTKKG 

       190        200        210        220        230        240 
SLIAVYDIRH NSSVDLQEDI DVGMSRSTDG GENWEPMKTI MDMEEWGGKP QKENGIGDPA 

       250        260        270        280        290        300 
ILVDPANNTI YVVALWLHGK PGERAWFSSG AGMSPDETGQ LMMVKSHDDG KTWSDPINIT 

       310        320        330        340        350        360 
RQIKKREWKL MFNGPGKGIT MRDGTLVFAG QYKDENDMPY STLIYSQDQG ETWHIGTGAK 

       370        380        390        400        410        420 
ANTTEAQVVE LNDGSLMLNM RDNRGGARSV AVTKDLGKTW KEHPSSRSAL VEPVCMASLI 

       430        440        450        460        470        480 
TYPENRQSMD ASHLFFSNPA VTDGRYNMTI KSSKDEGMSW TKGLLLDEGK GWGYSCLTVI 

       490        500 
DKEHLGILYE SSQAHMTFQI IRTTELIP 

« Hide

References

[1]"The complete genome of Echinicola vietnamensis DSM 17526."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17526 / LMG 23754 / KMM 6221.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003346 Genomic DNA. Translation: AGA80527.1.
RefSeqYP_007226537.1. NC_019904.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA80527; AGA80527; Echvi_4341.
GeneID14286066.
KEGGevi:Echvi_4341.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
PRINTSPR01803. TCSIALIDASE.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0G4S7_ECHVK
AccessionPrimary (citable) accession number: L0G4S7
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: June 11, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)