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L0FY89 (L0FY89_ECHVK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length194 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. SAAS SAAS020633 HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity SAAS SAAS020633 HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding24 – 318ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding96 – 994ATP By similarity HAMAP-Rule MF_00124

Sites

Active site971Proton acceptor By similarity HAMAP-Rule MF_00124
Metal binding1531Zinc By similarity HAMAP-Rule MF_00124
Metal binding1561Zinc By similarity HAMAP-Rule MF_00124
Metal binding1851Zinc By similarity HAMAP-Rule MF_00124
Metal binding1881Zinc By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
L0FY89 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 38CDB4C5F6F0AF2B

FASTA19421,865
        10         20         30         40         50         60 
MFIEPVIGNN TLKDKKGHIE VICGSMFSGK TEELIRRLNR ALIAKQKVEI FKPSLDTRYH 

        70         80         90        100        110        120 
DRDVVSHNET VIRSTPVQFA DDIMLLAGDC DVVGIDEVQF FDKQIVHVAN KLAIAGKRVI 

       130        140        150        160        170        180 
MAGLDMDFEG KPFDPMPQLL ASAEYVTKVH AICMKCGDLA SYSYRLTPAK EKVVLGEKDN 

       190 
YEARCRTCFY ETKS 

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References

[1]"The complete genome of Echinicola vietnamensis DSM 17526."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17526 / LMG 23754 / KMM 6221.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003346 Genomic DNA. Translation: AGA77726.1.
RefSeqYP_007223736.1. NC_019904.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA77726; AGA77726; Echvi_1460.
GeneID14283185.
KEGGevi:Echvi_1460.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00857.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020633. Thymidine_kinase_CS.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS00603. TK_CELLULAR_TYPE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0FY89_ECHVK
AccessionPrimary (citable) accession number: L0FY89
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 16, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)