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L0FXC5 (L0FXC5_ECHVK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Echvi_1692 EMBL AGA77957.1
OrganismEchinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) [Complete proteome] [HAMAP] EMBL AGA77957.1
Taxonomic identifier926556 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCyclobacteriaceaeEchinicola

Protein attributes

Sequence length414 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Sequences

Sequence LengthMass (Da)Tools
L0FXC5 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 2184B5344EA954A4

FASTA41445,086
        10         20         30         40         50         60 
MERISATYYI ETPFEVESAA AVLAGEQSSG TFVAVPGETA ELKQRFAARV ESIEKLETVS 

        70         80         90        100        110        120 
QPAIPGAVSS HGKYHRAMIS VSWSIENFGY NLPTMISTLQ GNLYEITQFT GLKLMDLEVP 

       130        140        150        160        170        180 
ASFAQHFAGP AFGIKGCREL TGVEAGRPLI GTIIKPSIGM RPEETAALVK TLVEAGIDFI 

       190        200        210        220        230        240 
KDDELMGSAA NSPFDKRVEA IMRVINAHAD KSGKKVMYAF NISDEMDRMH EHYDTVVKHG 

       250        260        270        280        290        300 
GTCAMMSINS VGMAGVKRIC DRRELAIHAH RNGWGMLNRH PLLGIDFRAY QKLWRLAGVD 

       310        320        330        340        350        360 
QLHVNGIQNK FWESDDSVVR SIAGCLTPML GGYQVLPVVS SGQWGGQAPE TYRRTETTDL 

       370        380        390        400        410 
LYMAGGGIMA HPAGPAGGVK ALQQAWRAAV DGLSVEEAAK KYEEFGLSVQ KFGK 

« Hide

References

[1]"The complete genome of Echinicola vietnamensis DSM 17526."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17526 / LMG 23754 / KMM 6221.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003346 Genomic DNA. Translation: AGA77957.1.
RefSeqYP_007223967.1. NC_019904.1.

3D structure databases

ProteinModelPortalL0FXC5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA77957; AGA77957; Echvi_1692.
GeneID14283417.
KEGGevi:Echvi_1692.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0FXC5_ECHVK
AccessionPrimary (citable) accession number: L0FXC5
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)