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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Theco_3020

Organism
Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Theco_3020Imported
OrganismiThermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4)Imported
Taxonomic identifieri717605 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaeThermobacillus
ProteomesiUP000010795 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

L0EHB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVKTTGTIT VQGERLSISN PDRVLWPEAG ITKLRYLEKL AELAPHLIRH
60 70 80 90 100
CEGRYLTVIR YPNGIHGKSF YQKNAPEPLP PFVRTAEQNG IRYVVLDSLP
110 120 130 140 150
TLIWLGNLAC LEFHASFDRI GELLRPAEWV IDLDPSREEE PRIMEAAWLA
160 170 180 190 200
GELLRSLGIA SVPKTSGATG VQIVVPVEPI LTFDELRAIG RFVGEYLVGK
210 220 230 240 250
YPKLFTIERL KKNRGDLIYF DYLQHYAGKT LSAPYTPRAR PAASVSTPLT
260 270 280 290
WDEVRADVRP ADFNLHTIGP RLARLGDLLE RAPKQNLRPI FEFIRGRQG
Length:299
Mass (Da):33,731
Last modified:March 6, 2013 - v1
Checksum:i0E4F9F4A5B9E06AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003255 Genomic DNA. Translation: AGA59081.1.
RefSeqiYP_007214079.1. NC_019897.1.

Genome annotation databases

EnsemblBacteriaiAGA59081; AGA59081; Theco_3020.
KEGGitco:Theco_3020.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003255 Genomic DNA. Translation: AGA59081.1.
RefSeqiYP_007214079.1. NC_019897.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGA59081; AGA59081; Theco_3020.
KEGGitco:Theco_3020.

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Thermobacillus composti KWC4."
    Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Teshima H., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Anderson I., Woyke T.
    Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18247 / JCM 13945 / KWC4Imported.

Entry informationi

Entry nameiL0EHB3_THECK
AccessioniPrimary (citable) accession number: L0EHB3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 29, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.