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L0DDD2 (L0DDD2_SINAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length566 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 zinc ion By similarity. RuleBase RU003435

Sequence similarities

Belongs to the peptidase M3 family. RuleBase RU003435

Ontologies

Keywords
   DomainSignal EMBL AGA26681.1
   LigandZinc RuleBase RU003435
   Molecular functionHydrolase
Metalloprotease RuleBase RU003435
Protease
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionmetalloendopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL AGA26681.1
Chain26 – 566541 Potential EMBL AGA26681.1
PRO_5001087397

Sequences

Sequence LengthMass (Da)Tools
L0DDD2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: D5F0217177D71023

FASTA56664,106
        10         20         30         40         50         60 
MLHRSAILTL TVLLMGISDI QAVSAAPEAT ADDVKAQRFV SDHVTRIRPL EQAAALAWWN 

        70         80         90        100        110        120 
ANVTGKDEDF ATKEEAQNRL DAALADPQRF SELKAIKQGH VADPVLKRQI EVLYLSYLEK 

       130        140        150        160        170        180 
QVDPQLLRKI TAKANAIEKA FNAYRATVDR HEMADSEVRK VLKESDDLPR RKAVWEASKG 

       190        200        210        220        230        240 
VGATVEADLK TLVALRNEAA HTLGFKNYHA MQLHLNEQSQ EQVLTLFDEL DALTRAPFHA 

       250        260        270        280        290        300 
AKAEIDTKLA DNFGLNVADL RPWHYHDPFF QETPAVFKTD LDEAYAKADI LDLCRKFYAG 

       310        320        330        340        350        360 
IGLPIEDVIG RSDLYEKPGK SPHAFCIDID REGDVRVLAN IVPNEYWMGT MLHELGHSVY 

       370        380        390        400        410        420 
SSKNIPRDLP YVLRTEAHIL TTEGVAMMFE KFSKDADWLQ QMGVKLADPR GFDEAGAKMR 

       430        440        450        460        470        480 
KNKLLIFSRW CQVMLRFEKA LYENPEQDLN ALWWDLVEKY QEVRRPEGRN APDYASKIHI 

       490        500        510        520        530        540 
VSAPAYYHNY MMGELFAAQV HHTIAREVLQ GVDPSKASYV GNPAVGRFLK ERLFGPGRSL 

       550        560 
TWDDLTRHVT GQSLNPKAFA LDFQSH 

« Hide

References

[1]"Complete sequence of chromosome of Singulisphaera acidiphila DSM 18658."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 18658 EMBL AGA26681.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003364 Genomic DNA. Translation: AGA26681.1.
RefSeqYP_007202376.1. NC_019892.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA26681; AGA26681; Sinac_2369.
GeneID14260721.
KEGGsaci:Sinac_2369.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01283.

Family and domain databases

Gene3D1.10.1370.10. 2 hits.
InterProIPR024077. Neurolysin/TOP_dom2.
IPR001567. Pept_M3A_M3B.
[Graphical view]
PfamPF01432. Peptidase_M3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameL0DDD2_SINAD
AccessionPrimary (citable) accession number: L0DDD2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: May 14, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)