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L0DCX2 (L0DCX2_SINAD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length410 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AGA27092.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3939 Potential EMBL AGA27092.1
Chain40 – 410371 Potential EMBL AGA27092.1
PRO_5001087347

Sequences

Sequence LengthMass (Da)Tools
L0DCX2 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 57666890113B55FF

FASTA41044,967
        10         20         30         40         50         60 
MIKKRVEAMR KRLGRRSLAI TFLTAWLIGD LGMSQAVLSA QLPSSKESGG KPAAKSQREG 

        70         80         90        100        110        120 
LMQLDVFVAG QDGYKSFRIP SLLVTPHGTV LAFCEGRKHS GGDSGDIDLV QRKSTDGGTT 

       130        140        150        160        170        180 
WGPLQVIADD GPHTMGNPCP VVDRETGTIW MLMTRNHGQD KESQILNGTS QETRSVWVMK 

       190        200        210        220        230        240 
STDEGLTWSP RVEITPQVKL PDWTWYATGP GVSIQLESGR MVVPCDHFLA KSKVSRSHVI 

       250        260        270        280        290        300 
YSDDHGATWK IGGVGGERVN ECQVAELSNR TLLLNMRHQP PRRGEGRAIS TSRDGGLTWT 

       310        320        330        340        350        360 
PPTLDPSLVE PACQASLIGL KDEQGRASNR LLFSNPASSK RELMTVRLSE DGGKTWSQHK 

       370        380        390        400        410 
SLHAGPSAYS CLANLAGRNI GCLYERGERG PYERITLARF DLDWLTSHPE 

« Hide

References

[1]"Complete sequence of chromosome of Singulisphaera acidiphila DSM 18658."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Ovchinnikova G., Chertkov O., Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 18658 EMBL AGA27092.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003364 Genomic DNA. Translation: AGA27092.1.
RefSeqYP_007202787.1. NC_019892.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGA27092; AGA27092; Sinac_2800.
GeneID14261152.
KEGGsaci:Sinac_2800.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0DCX2_SINAD
AccessionPrimary (citable) accession number: L0DCX2
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 16, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)