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Protein

Alpha-amylase

Gene

B938_01400

Organism
Bacillus amyloliquefaciens subsp. plantarum AS43.3
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:B938_01400Imported
OrganismiBacillus amyloliquefaciens subsp. plantarum AS43.3Imported
Taxonomic identifieri1225788 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000010484: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

L0BJ29-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFEKRFKTSL LPLFAGFLLL FHLVLSGPAA ANAETANKSN GVAASSVKNG
60 70 80 90 100
TILHAWNWSF NTLTQNMKDI RDAGYAAIQT SPINQVKEGN QGDKSMRNWY
110 120 130 140 150
WLYQPTSYQI GNRYLGTEQE FKDMCAAAEK YGVKVIVDAV INHTTSDYGA
160 170 180 190 200
ISDEIKRIPN WTHGNTQIKN WSDRWDVTQN SLLGLYDWNT QNTEVQAYLK
210 220 230 240 250
RFLERALNDG ADGFRYDAAK HIELPDDGNY GSQFWPNITN TSAEFQYGEI
260 270 280 290 300
LQDSASRDTA YANYMNVTAS NYGHSIRSAL KNRNLSVSNI SHYASDVSAD
310 320 330 340 350
KLVTWVESHD TYANDDEEST WMSEDDIRLG WAVIGSRSGS TPLFFSRPEG
360 370 380 390 400
GGNGVRFPGK SQIGDRGSAL FKDQAITAVN TFHNVMAGQP EELSNPNGNN
410 420 430 440 450
QIFMNQRGSK GVVLANAGSS SVTINTSTKL PDGRYDNRAG AGSFQVANGK
460 470 480 490 500
LTGTINARSA AVLYPDDIGN APHVFLENYQ TGAVHSFNDQ LTVTLRANTK
510 520 530 540 550
TTKAVYQINN GQQTAFKDGD RLTIGKGDPI GTTYNIKLTG TNGEGAARTQ
560 570 580 590 600
EYTFVKKDPS QTNIIGYQNP DHWGQVNAYI YKHDGGRAIE LTGSWPGKAM
610 620 630 640 650
TKNADGMYTL TLPENADTAN AKVIFNNGSA QVPGQNQPGF DYVQNGLYNN

SGLNGYLPH
Length:659
Mass (Da):72,384
Last modified:March 6, 2013 - v1
Checksum:iCBD63633B1D6349C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003838 Genomic DNA. Translation: AFZ89318.1.
RefSeqiWP_015239108.1. NC_019842.1.
YP_007184988.1. NC_019842.1.

Genome annotation databases

EnsemblBacteriaiAFZ89318; AFZ89318; B938_01400.
GeneIDi14252768.
KEGGibamp:B938_01400.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003838 Genomic DNA. Translation: AFZ89318.1.
RefSeqiWP_015239108.1. NC_019842.1.
YP_007184988.1. NC_019842.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFZ89318; AFZ89318; B938_01400.
GeneIDi14252768.
KEGGibamp:B938_01400.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genomic analysis and secondary metabolite production in Bacillus amyloliquefaciens AS 43.3: a biocontrol antagonist of Fusarium Head Blight."
    Dunlap C.A., Bowman M.J., Schisler D.A.
    Biol. Control 64:166-175(2013)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AS43.3Imported.

Entry informationi

Entry nameiL0BJ29_BACAM
AccessioniPrimary (citable) accession number: L0BJ29
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: January 7, 2015
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.