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L0BJ29 (L0BJ29_BACAM) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length659 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
L0BJ29 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: CBD63633B1D6349C

FASTA65972,384
        10         20         30         40         50         60 
MFEKRFKTSL LPLFAGFLLL FHLVLSGPAA ANAETANKSN GVAASSVKNG TILHAWNWSF 

        70         80         90        100        110        120 
NTLTQNMKDI RDAGYAAIQT SPINQVKEGN QGDKSMRNWY WLYQPTSYQI GNRYLGTEQE 

       130        140        150        160        170        180 
FKDMCAAAEK YGVKVIVDAV INHTTSDYGA ISDEIKRIPN WTHGNTQIKN WSDRWDVTQN 

       190        200        210        220        230        240 
SLLGLYDWNT QNTEVQAYLK RFLERALNDG ADGFRYDAAK HIELPDDGNY GSQFWPNITN 

       250        260        270        280        290        300 
TSAEFQYGEI LQDSASRDTA YANYMNVTAS NYGHSIRSAL KNRNLSVSNI SHYASDVSAD 

       310        320        330        340        350        360 
KLVTWVESHD TYANDDEEST WMSEDDIRLG WAVIGSRSGS TPLFFSRPEG GGNGVRFPGK 

       370        380        390        400        410        420 
SQIGDRGSAL FKDQAITAVN TFHNVMAGQP EELSNPNGNN QIFMNQRGSK GVVLANAGSS 

       430        440        450        460        470        480 
SVTINTSTKL PDGRYDNRAG AGSFQVANGK LTGTINARSA AVLYPDDIGN APHVFLENYQ 

       490        500        510        520        530        540 
TGAVHSFNDQ LTVTLRANTK TTKAVYQINN GQQTAFKDGD RLTIGKGDPI GTTYNIKLTG 

       550        560        570        580        590        600 
TNGEGAARTQ EYTFVKKDPS QTNIIGYQNP DHWGQVNAYI YKHDGGRAIE LTGSWPGKAM 

       610        620        630        640        650 
TKNADGMYTL TLPENADTAN AKVIFNNGSA QVPGQNQPGF DYVQNGLYNN SGLNGYLPH 

« Hide

References

[1]"Genomic analysis and secondary metabolite production in Bacillus amyloliquefaciens AS 43.3: a biocontrol antagonist of Fusarium Head Blight."
Dunlap C.A., Bowman M.J., Schisler D.A.
Biol. Control 64:166-175(2013)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AS43.3 EMBL AFZ89318.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003838 Genomic DNA. Translation: AFZ89318.1.
RefSeqYP_007184988.1. NC_019842.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFZ89318; AFZ89318; B938_01400.
GeneID14252768.
KEGGbamp:B938_01400.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameL0BJ29_BACAM
AccessionPrimary (citable) accession number: L0BJ29
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: July 9, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)