Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

K9WBS6 (K9WBS6_9CYAN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alpha-amylase RuleBase RU361134

EC=3.2.1.1 RuleBase RU361134
Gene names
ORF Names:Mic7113_1073 EMBL AFZ16967.1
OrganismMicrocoleus sp. PCC 7113 [Complete proteome] EMBL AFZ16967.1
Taxonomic identifier1173027 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeOscillatorialesMicrocoleus

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential EMBL AFZ16967.1
Chain35 – 467433 Potential EMBL AFZ16967.1
PRO_5001078783

Sequences

Sequence LengthMass (Da)Tools
K9WBS6 [UniParc].

Last modified March 6, 2013. Version 1.
Checksum: 885604E4C76C3243

FASTA46752,273
        10         20         30         40         50         60 
MQRSFPSFLG LCTALVLFTA ITSGCRAPSI EANAKPSPST TASENFNRST TAKAGVIYHA 

        70         80         90        100        110        120 
FNMRFRDIKT QLPELQKQGY TYIQVSPPQK SNPSPEWWAR YQPIDHTIID SPLGNEQELK 

       130        140        150        160        170        180 
ELINTAHKRK LKIIIDVVFN HMANYGDYVK NLKYPRFSSQ HFHPQNCINY NTRHSVIQGW 

       190        200        210        220        230        240 
INCDLPDLKT TSPHVRQEAK NYLKKLLALG ADGFRFDAAK HIEPDFFRDI LTVVPPDKLV 

       250        260        270        280        290        300 
YGEVIGQTLA ESNEYTGILW VTDFHLVSTM SNAFSYGGDL RSLINPAISG QALPGIKAVT 

       310        320        330        340        350        360 
FAHNHDIAQG QIGYKLPTPQ DIKLANAYIL ARQEGFPIVY TDDAKDAITK AGVFFHQKFM 

       370        380        390        400        410        420 
GEAQYFRNGN EIAQGADNPN ILFIERGNKG FAIINKAGES FDVKAAKMPG LQIGCYQEVR 

       430        440        450        460 
YNFTMAVGKG DDQQKYITQW GTKQRGGIQI GSRDALFFVP TSANECQ 

« Hide

References

[1]"Finished chromosome of genome of Microcoleus sp. PCC 7113."
US DOE Joint Genome Institute
Gugger M., Coursin T., Rippka R., Tandeau De Marsac N., Huntemann M., Wei C.-L., Han J., Detter J.C., Han C., Tapia R., Chen A., Kyrpides N., Mavromatis K., Markowitz V., Szeto E., Ivanova N., Pagani I., Pati A. expand/collapse author list , Goodwin L., Nordberg H.P., Cantor M.N., Hua S.X., Woyke T., Kerfeld C.A.
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PCC 7113 EMBL AFZ16967.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003630 Genomic DNA. Translation: AFZ16967.1.
RefSeqYP_007120373.1. NC_019738.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAFZ16967; AFZ16967; Mic7113_1073.
GeneID14147055.
KEGGmic:Mic7113_1073.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK9WBS6_9CYAN
AccessionPrimary (citable) accession number: K9WBS6
Entry history
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)