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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Chro_0873

Organism
Chroococcidiopsis thermalis PCC 7203
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
ORF Names:Chro_0873Imported
OrganismiChroococcidiopsis thermalis PCC 7203Imported
Taxonomic identifieri251229 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaPleurocapsalesChroococcidiopsis
ProteomesiUP000010384 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

K9TV29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNLWYKNAI VYSLDVETFM DSDGDGVGDF PGLTQKLDYL AGLGITCLWL
60 70 80 90 100
LPFYPSPNRD NGYDVMDYYG VDPRLGTLGD FVEFMHKARE RGIRVIVDLV
110 120 130 140 150
VNHTSIAHPW FQEARSDRNS KYRNYYVWSD NPPPADPKHI AFPDVEDSLW
160 170 180 190 200
DYDDKAGAYY LHHFYKEQPD LNIANPAVRE EICKIMGFWL ELGVSGFRID
210 220 230 240 250
AAPFLIQGIG IPDAKPEDLE GFLIEMREFL VSRRADAILL AEANVDADQI
260 270 280 290 300
GVYFGNGDKM QMLFSFLLNQ HMFLALARQD AATLVEGLKI LPDAHHTCQW
310 320 330 340 350
LNFVRHHDEL TLDRLQESEI QEIFQAFAPE ENMQMWGRGV RRRLPPMLEG
360 370 380 390 400
DRQRVELVYS LLLTLPGTPM LRYGEEIGMG DDLSLEGRGS VRTVMQWSSK
410 420 430 440 450
ANGGFSSAPA DKLARPAIDT GEYGYQKLNV TSQQRDPNSI LSWMERAIRT
460 470 480 490 500
RKQYPEFGSG KWKIVATNEP SVFAHSSQQN GNTVIAIHNL SAQPRTITMK
510 520 530
SAEDPHLLDV FSDRPYEQID CHSNSIEISG YGYRWFQVN
Length:539
Mass (Da):61,454
Last modified:March 6, 2013 - v1
Checksum:i8EE0EC5BD6075B14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003597 Genomic DNA. Translation: AFY86410.1.
RefSeqiWP_015152960.1. NC_019695.1.
YP_007090279.1. NC_019695.1.

Genome annotation databases

EnsemblBacteriaiAFY86410; AFY86410; Chro_0873.
KEGGicthe:Chro_0873.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003597 Genomic DNA. Translation: AFY86410.1.
RefSeqiWP_015152960.1. NC_019695.1.
YP_007090279.1. NC_019695.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFY86410; AFY86410; Chro_0873.
KEGGicthe:Chro_0873.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: PCC 7203Imported.

Entry informationi

Entry nameiK9TV29_9CYAN
AccessioniPrimary (citable) accession number: K9TV29
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: April 1, 2015
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.