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Protein
Submitted name:

HD-GYP domain-containing protein

Gene

Syn6312_0817

Organism
Synechococcus sp. (strain ATCC 27167 / PCC 6312)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSSP195253:GLM1-786-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HD-GYP domain-containing proteinImported
Gene namesi
Ordered Locus Names:Syn6312_0817Imported
OrganismiSynechococcus sp. (strain ATCC 27167 / PCC 6312)Imported
Taxonomic identifieri195253 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeSynechococcus
Proteomesi
  • UP000010379 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliK9RR69.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 234GAFInterPro annotationAdd BLAST175
Domaini251 – 521HDcInterPro annotationAdd BLAST271

Phylogenomic databases

OrthoDBiPOG091H023E.

Family and domain databases

Gene3Di1.10.3210.10. 2 hits.
3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

K9RR69-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGYTWNVQQ ICVQGAAIKL RPMNPSPKTT LPPVDVLSHD PRGLVTELLA
60 70 80 90 100
VGTALSATEN LSDLLTLILT KSREITCSDA GSVFLVDRQA HPPNLWFKTA
110 120 130 140 150
QNDTHPELSL HEFFIPLNAE SLVGYVALTG EILNIPDAYE IPQAETYQFN
160 170 180 190 200
RSFDDNLGYR TRSVLVIPMQ NAEGEIIGVL QLLNRKIRAD IKITPDNATD
210 220 230 240 250
VTVPYSHWEE AILRSLASQA AVSIERNHLL ESIEKLFEGF VTASVQAIEA
260 270 280 290 300
RDKITAGHSE RVADLTLRLA AEVNDQAGIG AFVGVGFDQR QLQELRYAAL
310 320 330 340 350
LHDFGKVGVP EVILSKEKKL YPLQLEIIRQ RFHFVRRTLE LECNQAKLDY
360 370 380 390 400
LQANPHHDPD AGTCDHCQQL RQFDLQLQAQ LQNLDRYWQV VEIANEPKVL
410 420 430 440 450
AEEPLGILQE LTSWHYKDIN GHLQPLVTIA ELEQLLVRRG NLTPQERLAI
460 470 480 490 500
ESHVTHTYEF LRRIPWTSSL KDVPIIAYGH HERLNGTGYP LGIADIPLQT
510 520 530 540 550
QMLTIADIYD ALTAADRPYK KSLPVPIALK ILHQEAESNQ INRDLVLLFE
560
QKQVFQVLGH GLAD
Length:564
Mass (Da):63,494
Last modified:March 6, 2013 - v1
Checksum:iB3DBF6FA2AE8CEB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003558 Genomic DNA. Translation: AFY60031.1.

Genome annotation databases

EnsemblBacteriaiAFY60031; AFY60031; Syn6312_0817.
KEGGisyne:Syn6312_0817.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003558 Genomic DNA. Translation: AFY60031.1.

3D structure databases

ProteinModelPortaliK9RR69.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFY60031; AFY60031; Syn6312_0817.
KEGGisyne:Syn6312_0817.

Phylogenomic databases

OrthoDBiPOG091H023E.

Enzyme and pathway databases

BioCyciSSP195253:GLM1-786-MONOMER.

Family and domain databases

Gene3Di1.10.3210.10. 2 hits.
3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF01966. HD. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00471. HDc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiK9RR69_SYNP3
AccessioniPrimary (citable) accession number: K9RR69
Entry historyi
Integrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: November 2, 2016
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.