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Protein
Submitted name:

Endonuclease domain containing 1

Gene

ENDOD1

Organism
Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Endonuclease domain containing 1Imported
Gene namesi
Name:ENDOD1Imported
OrganismiPelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)Imported
Taxonomic identifieri13735 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaTestudinesCryptodiraTrionychiaTrionychidaePelodiscus
Proteomesi
  • UP000007267 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei366 – 386HelicalSequence analysisAdd BLAST21
Transmembranei411 – 432HelicalSequence analysisAdd BLAST22
Transmembranei444 – 469HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_500390220621 – 475Sequence analysisAdd BLAST455

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 262Endonuclease_NSInterPro annotationAdd BLAST203
Domaini61 – 259NUCInterPro annotationAdd BLAST199

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410J1DZ. Eukaryota.
ENOG4111RBI. LUCA.
GeneTreeiENSGT00530000063903.
OMAiSIPWKVL.
OrthoDBiEOG091G05HX.
TreeFamiTF333322.

Family and domain databases

InterProiView protein in InterPro
IPR001604. DNA/RNA_non-sp_Endonuclease.
IPR020821. Extracellular_endonuc_su_A.
PfamiView protein in Pfam
PF01223. Endonuclease_NS. 1 hit.
SMARTiView protein in SMART
SM00892. Endonuclease_NS. 1 hit.
SM00477. NUC. 1 hit.

Sequencei

Sequence statusi: Complete.

K7FWS7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKMTILFSLC ILAFPVFSQG RVVGVDEVGF AECNEFFYGE TPPEGFTEPF
60 70 80 90 100
HVKICQQYNK EPRFATLYNT EDKTPLYSAF KYTKATQRGE ESWLIEPQLD
110 120 130 140 150
DPGNDLKEMV HEADTVGSVN NLGANQALIT DYVDSGYERG QLNLGSLNEA
160 170 180 190 200
DFQLATYTLT NAVPMTPSLS KSWHRDVEHI VKQAVAPHCE NGARLYLVVG
210 220 230 240 250
AVPSTLRIKD KVSVPEFLWL AACCDAPEAW SVGFVKRRSD ENSIEDLSVE
260 270 280 290 300
ELEKQLPSGA RLFKSNCGGG NQSQDKMEAI LQSINQIQSE EPILQTVAGE
310 320 330 340 350
LGEGQRANEK RGEASLLRRI ASIIAIPFTK LLRIIVYVLV EVVRYTCSFL
360 370 380 390 400
WYVIKQFGNI VMGRLYSVWN GVVTYVTAIS TVLVNIPRDV AKVAANIVMG
410 420 430 440 450
FVRIFQNTLS LIYRILSVPG GLFLHIMAFP LDTLCATPTV LKDIAAGVGG
460 470
TCSLIVDATA ALMSGFYYIG SSRTP
Length:475
Mass (Da):52,460
Last modified:January 9, 2013 - v1
Checksum:iAEF6356E20277617
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGCU01169243 Genomic DNA. No translation available.
AGCU01169244 Genomic DNA. No translation available.
AGCU01169245 Genomic DNA. No translation available.
AGCU01169246 Genomic DNA. No translation available.
RefSeqiXP_006135653.1. XM_006135591.2.

Genome annotation databases

EnsembliENSPSIT00000012548; ENSPSIP00000012487; ENSPSIG00000011246.
GeneIDi102452782.

Similar proteinsi

Entry informationi

Entry nameiK7FWS7_PELSI
AccessioniPrimary (citable) accession number: K7FWS7
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: September 27, 2017
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported