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Protein
Submitted name:

PQ loop repeat containing 1

Gene

PQLC1

Organism
Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
PQ loop repeat containing 1Imported
Gene namesi
Name:PQLC1Imported
OrganismiPelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)Imported
Taxonomic identifieri13735 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaTestudinesCryptodiraTrionychiaTrionychidaePelodiscus
Proteomesi
  • UP000007267 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei16 – 37HelicalSequence analysisAdd BLAST22
Transmembranei49 – 71HelicalSequence analysisAdd BLAST23
Transmembranei77 – 95HelicalSequence analysisAdd BLAST19
Transmembranei143 – 162HelicalSequence analysisAdd BLAST20
Transmembranei228 – 251HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi13735.ENSPSIP00000005747.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2913. Eukaryota.
ENOG4111FM2. LUCA.
GeneTreeiENSGT00390000002381.
OMAiLYRNYQN.
OrthoDBiEOG091G0IP7.
TreeFamiTF313072.

Family and domain databases

InterProiView protein in InterPro
IPR006603. PQ-loop_rpt.
PfamiView protein in Pfam
PF04193. PQ-loop. 2 hits.
SMARTiView protein in SMART
SM00679. CTNS. 2 hits.

Sequencei

Sequence statusi: Complete.

K7FCI7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEADGLKWLV VPMHQLVSWG AAGAMVFGGV VPYIPQYRDI KRTQNAEGFS
60 70 80 90 100
TYVCLVLLVA NILRILFWFG RHFESPLLWQ SIIMIITMLL MLKLCTEVRV
110 120 130 140 150
SNELNIKRRS FSAADSKDEE FKAPPKRSYL DFDLNYFWHW SKFTDYVQCV
160 170 180 190 200
LTFTGVTGYI TYLSLDSFLF VETLGFLAVF TEAMLGVPQL YRNYQNRSTE
210 220 230 240 250
GMSVKMVLMW TSGDTFKTFY FILNQAPFQF SICGLLQVFV DMAILLQVYF
260 270
YSYYPQKPAS HTTHPASTKA L
Length:271
Mass (Da):31,293
Last modified:January 9, 2013 - v1
Checksum:i057B90BE67DD425E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGCU01158198 Genomic DNA. No translation available.
AGCU01158199 Genomic DNA. No translation available.
AGCU01158200 Genomic DNA. No translation available.
AGCU01158201 Genomic DNA. No translation available.
AGCU01158202 Genomic DNA. No translation available.
AGCU01158203 Genomic DNA. No translation available.
AGCU01158204 Genomic DNA. No translation available.
AGCU01158205 Genomic DNA. No translation available.
RefSeqiXP_006134080.1. XM_006134018.1.

Genome annotation databases

EnsembliENSPSIT00000005781; ENSPSIP00000005747; ENSPSIG00000005326.
GeneIDi102454496.

Similar proteinsi

Entry informationi

Entry nameiK7FCI7_PELSI
AccessioniPrimary (citable) accession number: K7FCI7
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: September 27, 2017
This is version 25 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported