Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

TNF receptor-associated factor 4

Gene

TRAF4

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri102 – 154TRAF-typePROSITE-ProRule annotationAdd BLAST53
Zinc fingeri155 – 208TRAF-typePROSITE-ProRule annotationAdd BLAST54
Zinc fingeri209 – 266TRAF-typePROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionReceptorImported
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
TNF receptor-associated factor 4Imported
Gene namesi
Name:TRAF4Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan

Subcellular locationi

Structurei

3D structure databases

SMRiK7B4A6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 58RING-typeInterPro annotationAdd BLAST41
Domaini102 – 154TRAF-typeInterPro annotationAdd BLAST53
Domaini155 – 208TRAF-typeInterPro annotationAdd BLAST54
Domaini209 – 266TRAF-typeInterPro annotationAdd BLAST58
Domaini307 – 462MATHInterPro annotationAdd BLAST156

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili278 – 305Sequence analysisAdd BLAST28

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri102 – 154TRAF-typePROSITE-ProRule annotationAdd BLAST53
Zinc fingeri155 – 208TRAF-typePROSITE-ProRule annotationAdd BLAST54
Zinc fingeri209 – 266TRAF-typePROSITE-ProRule annotationAdd BLAST58

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG0297. Eukaryota.
ENOG410Z7YX. LUCA.

Family and domain databases

Gene3Di2.60.210.10. 1 hit.
3.30.40.10. 6 hits.
InterProiView protein in InterPro
IPR002083. MATH/TRAF_dom.
IPR012227. TNF_rcpt--assoc_TRAF.
IPR008974. TRAF-like.
IPR027138. TRAF4.
IPR018957. Znf_C3HC4_RING-type.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
IPR001293. Znf_TRAF.
PANTHERiPTHR10131:SF118. PTHR10131:SF118. 2 hits.
PfamiView protein in Pfam
PF00097. zf-C3HC4. 1 hit.
PF02176. zf-TRAF. 2 hits.
PIRSFiPIRSF015614. TRAF. 1 hit.
SMARTiView protein in SMART
SM00061. MATH. 1 hit.
SM00184. RING. 1 hit.
SUPFAMiSSF49599. SSF49599. 3 hits.
PROSITEiView protein in PROSITE
PS50144. MATH. 1 hit.
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
PS50145. ZF_TRAF. 3 hits.

Sequencei

Sequence statusi: Complete.

K7B4A6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGFDYKFLE KPKRRLLCPL CGKPMREPVQ VSTCGHRFCD TCLQEFLSEG
60 70 80 90 100
VFKCPEDQLP LDYAKIYPDP ELEVQVLGLP IRCIHSEEGC RWSGPLRHLQ
110 120 130 140 150
GHLNTCSFNV IPCPNRCPMK LSRRDLPAHL QHDCPKRRLK CEFCGCDFSG
160 170 180 190 200
EAYESHEGMC PQESVYCENK CGARMMRRLL AQHATSECPK RTQPCTYCTK
210 220 230 240 250
EFVFDTIQSH QYQCPRLPVA CPNQCGVGTV AREDLPGHLK DSCNTALVLC
260 270 280 290 300
PFKDSGCKHR CPKLAMARHV EESVKPHLAM MCALVSRQRQ ELQELRRELE
310 320 330 340 350
ELSVGSDGVL IWKIGSYGRR LQEAKAKPNL ECFSPAFYTH KYGYKLQVSA
360 370 380 390 400
FLNGNGSGEG THLSLYIRVL PGAFDNLLEW PFARRVTFSL LDQSDPGLAK
410 420 430 440 450
PQHVTETFHP DPNWKNFQKP GTWRGSLDES SLGFGYPKFI SHQDIRKRNY
460 470
VRDDAVFIRA AVELPRKILS
Length:470
Mass (Da):53,543
Last modified:January 9, 2013 - v1
Checksum:iA3F57E0E1081AB88
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GABC01004478 mRNA. Translation: JAA06860.1.
GABF01009346 mRNA. Translation: JAA12799.1.
GABD01010265 mRNA. Translation: JAA22835.1.
GABE01010946 mRNA. Translation: JAA33793.1.

Similar proteinsi

Entry informationi

Entry nameiK7B4A6_PANTR
AccessioniPrimary (citable) accession number: K7B4A6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: November 22, 2017
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)