Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

K7ADC1

- K7ADC1_9ALTE

UniProt

K7ADC1 - K7ADC1_9ALTE

Protein

Xylose isomerase

Gene

xylA

Organism
Glaciecola psychrophila 170
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (09 Jan 2013)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei101 – 1011UniRule annotation
    Active sitei104 – 1041UniRule annotation
    Metal bindingi232 – 2321Magnesium 1UniRule annotation
    Metal bindingi268 – 2681Magnesium 1UniRule annotation
    Metal bindingi268 – 2681Magnesium 2UniRule annotation
    Metal bindingi271 – 2711Magnesium 2UniRule annotation
    Metal bindingi296 – 2961Magnesium 1UniRule annotation
    Metal bindingi307 – 3071Magnesium 2UniRule annotation
    Metal bindingi309 – 3091Magnesium 2UniRule annotation
    Metal bindingi339 – 3391Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotationImported
    ORF Names:C427_4907Imported, GPSY_4639Imported
    OrganismiGlaciecola psychrophila 170Imported
    Taxonomic identifieri1129794 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
    ProteomesiUP000011864: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K7ADC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTTYFDAIPN IQFEGAESDS PLAFHHYNAN EVVLGKTMSE HLRFAACYWH    50
    NFCWDGADVF GQGTFNRPWL KPCDPMQMAI QKADVAFEFF SKLNIPYYCF 100
    HDIDVAPEGD SIHDYVNNFS TMVDVLEQKQ SETGLRLLWG TANLFSNPRF 150
    AAGGASNPNP DVFSYGATQV FHAMNATKRL GGENYVLWGG REGYESLLNT 200
    DLRQEREQLG RFFTMVAEHK HKIGFKGALL IEPKPQEPTK HQYDYDTASV 250
    YGFLKQYGLE QEFKVNIEAN HATLAGHSFH HEIATAISLG IFGSIDANRG 300
    DPQNGWDTDQ FPTAVDELSL VMYEILKSGG FTTGGLNFDC KLRRQSSDPA 350
    DLFHGHIGGM DHMALALKKA AAILENDFIA DKLSQRYEGW GQHFGQSILN 400
    GQQNLESLAS HTLSNSLQPK HVSGQQEMME NKVNRVLFG 439
    Length:439
    Mass (Da):49,229
    Last modified:January 9, 2013 - v1
    Checksum:iDEFA1A04110BD272
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003837 Genomic DNA. Translation: AGH47006.1.
    BAES01000095 Genomic DNA. Translation: GAC40242.1.
    RefSeqiWP_007643107.1. NZ_BAES01000095.1.
    YP_007546354.1. NC_020514.1.

    Genome annotation databases

    EnsemblBacteriaiAGH47006; AGH47006; C427_4907.
    GAC40242; GAC40242; GPSY_4639.
    GeneIDi14781622.
    KEGGigps:C427_4907.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003837 Genomic DNA. Translation: AGH47006.1 .
    BAES01000095 Genomic DNA. Translation: GAC40242.1 .
    RefSeqi WP_007643107.1. NZ_BAES01000095.1.
    YP_007546354.1. NC_020514.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGH47006 ; AGH47006 ; C427_4907 .
    GAC40242 ; GAC40242 ; GPSY_4639 .
    GeneIDi 14781622.
    KEGGi gps:C427_4907.

    Phylogenomic databases

    KOi K01805.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Qin Q.L., Xie B.B., Shu Y.L., Zhang Y.Z.
      Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 170Imported.
    2. "Complete Genome Sequence of Glaciecola psychrophila Strain 170T."
      Yin J., Chen J., Liu G., Yu Y., Song L., Wang X., Qu X.
      Genome Announc. 1:E00199-13(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 170Imported.
    3. "Comparative genomics of the marine bacterial genus Glaciecola reveals the high degree of genomic diversity and genomic characteristic for cold adaptation."
      Qin Q.-L., Xie B.-B., Yu Y., Shu Y.-L., Rong J.-C., Zhang Y.-J., Zhao D.-L., Chen X.-L., Zhang X.-Y., Chen B., Zhou B.-C., Zhang Y.-Z.
      Environ. Microbiol. 16:1642-1653(2014) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 170Imported.

    Entry informationi

    Entry nameiK7ADC1_9ALTE
    AccessioniPrimary (citable) accession number: K7ADC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 9, 2013
    Last sequence update: January 9, 2013
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3