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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Bradyrhizobium lupini HPC(L)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotationSAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotationSAAS annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotationSAAS annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei418NucleophileUniRule annotation1
Active sitei471Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotationSAAS annotationImported, Transferase
Biological processCarbohydrate metabolism, Glycogen biosynthesisUniRule annotationSAAS annotation, Glycogen metabolismUniRule annotationSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00164

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
ORF Names:C241_07658Imported
OrganismiBradyrhizobium lupini HPC(L)Imported
Taxonomic identifieri1229491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000017668 Componenti: Unassembled WGS sequence

Interactioni

Subunit structurei

Monomer.UniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini261 – 630AamyInterPro annotationAdd BLAST370

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotationSAAS annotation

Family and domain databases

Gene3Di2.60.40.101 hit
2.60.40.11801 hit
HAMAPiMF_00685 GlgB, 1 hit
InterProiView protein in InterPro
IPR006048 A-amylase/branching_C
IPR037439 Branching_enzy
IPR006407 GlgB
IPR006047 Glyco_hydro_13_cat_dom
IPR004193 Glyco_hydro_13_N
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
PANTHERiPTHR43651 PTHR43651, 2 hits
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02806 Alpha-amylase_C, 1 hit
PF02922 CBM_48, 1 hit
PIRSFiPIRSF000463 GlgB, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 2 hits
TIGRFAMsiTIGR01515 branching_enzym, 1 hit

Sequencei

Sequence statusi: Complete.

K5CT07-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKPLNSAEE KKTGDITKAE IEAIKSGLHS NPFALLGVHE TPEGFSARCF
60 70 80 90 100
IPGAEEVSVL TLDGNFVGEL KQLDPDGFFE GPIDISKRQP VRYRACRDDA
110 120 130 140 150
EWAVTDPYSF GPVLGPMDDY FVREGSHLRL FDKMGAHPLK LEGVEGFHFA
160 170 180 190 200
VWAPNARRVS VVGDFNNWDG RRHVMRFRKD TGIWEIFAPD VYAGCAYKFE
210 220 230 240 250
ILGANGELLP LKADPYARRA ELRPKNASVT TSELTQKWED QAHREHWAQV
260 270 280 290 300
DQRRQPISIY EVHAGSWQRR EDGTFLSWDE LAAQLIPYCT DMGFTHIEFL
310 320 330 340 350
PITEHPYDPS WGYQTTGLYA PSARFGDPEG FARFVNGAHK VGIGVLLDWV
360 370 380 390 400
PAHFPTDEHG LRWFDGTALY EHADPRQGFH PDWNTAIYNF GRVEVMSYLI
410 420 430 440 450
NNALYWAEKF HLDGLRVDAV ASMLYLDYSR KEGEWIPNEY GGRENLESVR
460 470 480 490 500
FLQKMNSLVY GTHPGVMTIA EESTSWPKVS QPVHEGGLGF GFKWNMGFMH
510 520 530 540 550
DTLSYFSREP VHRKFHHQEL TFGLLYAFTE NFVLPLSHDE VVHGKGSLIA
560 570 580 590 600
KMSGDDWQKF ANLRSYYGFM WGYPGKKLLF MGQEFAQWSE WSEKGALDWN
610 620 630 640 650
LRQYPMHEGM RRLVRDLNLT YRSKAALHAR DCEPDGFRWL VVDDHENSVF
660 670 680 690 700
AWLRTAPGEK PVAVICNLTP VYRENYYVPL PQAGRWREIL NTDAEIYGGS
710 720 730
GKGNGGRVQA VDAGGDIGAM LVLPPLATIM LEPEN
Length:735
Mass (Da):83,678
Last modified:January 9, 2013 - v1
Checksum:iAE55415B2ABC5EFA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMQQ01000012 Genomic DNA Translation: EKJ96329.1

Genome annotation databases

EnsemblBacteriaiEKJ96329; EKJ96329; C241_07658
PATRICifig|1229491.3.peg.1559

Similar proteinsi

Entry informationi

Entry nameiK5CT07_RHILU
AccessioniPrimary (citable) accession number: K5CT07
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: February 28, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported