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K4QL95 (K4QL95_BORBO) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.39 EMBL CCJ54329.1
Gene names
ORF Names:BN112_2412 EMBL CCJ54329.1
OrganismBordetella bronchiseptica 253 [Complete proteome] EMBL CCJ54329.1
Taxonomic identifier568707 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length423 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL CCJ54329.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K4QL95 [UniParc].

Last modified January 9, 2013. Version 1.
Checksum: 7A3B6EE316F11844

FASTA42345,172
        10         20         30         40         50         60 
MSDRFEATYL IETPHDVASV AQELAGEQST ATSSRMPGET DALIRDFGAR VEHIEALPPA 

        70         80         90        100        110        120 
EAPSLPVAHT PGQRVHRARL TLSWPLHNIG DSLPMLLTTL LGNQTGMRRL SGIRLERVAM 

       130        140        150        160        170        180 
PQSFIAAQPR PAFGIAGTRR LTGVQGRPLI GSIVKPNIGL APEQTAAMAR QLAEGGVDFI 

       190        200        210        220        230        240 
KDDELLANPP YSPVARRAAL VLRALDEAAQ RTGRRTMYAV NITDGLDEMR RHHDAVVQAG 

       250        260        270        280        290        300 
GTCIMVNLNS VGLSALLALR RHSQLPIHGH RAGWAMMTRC PALGMEFQPY QMLHRLAGVD 

       310        320        330        340        350        360 
HLHVSGLGGK FWEHADSVLQ AAHECLTPLD TQAGAADDRA LPVFSGGSTI FDVAPTYQGI 

       370        380        390        400        410        420 
GTADLIFASG GGIFGHPDGL AAGCASLRQA WEAAIAGQEL RAYAQSRPEL AAALARGKPV 


RKA 

« Hide

References

[1]"Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens."
Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T.
BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 253 EMBL CCJ54329.1.
[2]Aslett M.
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 253 EMBL CCJ54329.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE965806 Genomic DNA. Translation: CCJ54329.1.
RefSeqYP_006968469.1. NC_019382.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCJ54329; CCJ54329; BN112_2412.
GeneID13979470.
KEGGbbh:BN112_2412.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK4QL95_BORBO
AccessionPrimary (citable) accession number: K4QL95
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: January 22, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)