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Protein
Submitted name:

Putative ribulose bisphosphate carboxylaseoxygenase,large subunit

Gene

BN112_2412

Organism
Bordetella bronchiseptica 253
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribulose bisphosphate carboxylaseoxygenase,large subunitImported (EC:4.1.1.39Imported)
Gene namesi
ORF Names:BN112_2412Imported
OrganismiBordetella bronchiseptica 253Imported
Taxonomic identifieri568707 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella
ProteomesiUP000007564: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K4QL95-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSDRFEATYL IETPHDVASV AQELAGEQST ATSSRMPGET DALIRDFGAR
60 70 80 90 100
VEHIEALPPA EAPSLPVAHT PGQRVHRARL TLSWPLHNIG DSLPMLLTTL
110 120 130 140 150
LGNQTGMRRL SGIRLERVAM PQSFIAAQPR PAFGIAGTRR LTGVQGRPLI
160 170 180 190 200
GSIVKPNIGL APEQTAAMAR QLAEGGVDFI KDDELLANPP YSPVARRAAL
210 220 230 240 250
VLRALDEAAQ RTGRRTMYAV NITDGLDEMR RHHDAVVQAG GTCIMVNLNS
260 270 280 290 300
VGLSALLALR RHSQLPIHGH RAGWAMMTRC PALGMEFQPY QMLHRLAGVD
310 320 330 340 350
HLHVSGLGGK FWEHADSVLQ AAHECLTPLD TQAGAADDRA LPVFSGGSTI
360 370 380 390 400
FDVAPTYQGI GTADLIFASG GGIFGHPDGL AAGCASLRQA WEAAIAGQEL
410 420
RAYAQSRPEL AAALARGKPV RKA
Length:423
Mass (Da):45,172
Last modified:January 9, 2013 - v1
Checksum:i7A3B6EE316F11844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE965806 Genomic DNA. Translation: CCJ54329.1.
RefSeqiYP_006968469.1. NC_019382.1.

Genome annotation databases

EnsemblBacteriaiCCJ54329; CCJ54329; BN112_2412.
GeneIDi13979470.
KEGGibbh:BN112_2412.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE965806 Genomic DNA. Translation: CCJ54329.1.
RefSeqiYP_006968469.1. NC_019382.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCJ54329; CCJ54329; BN112_2412.
GeneIDi13979470.
KEGGibbh:BN112_2412.

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of the classical Bordetella subspecies: the evolution and exchange of virulence-associated diversity amongst closely related pathogens."
    Park J., Zhang Y., Buboltz A.M., Zhang X., Schuster S.C., Ahuja U., Liu M., Miller J.F., Sebaihia M., Bentley S.D., Parkhill J., Harvill E.T.
    BMC Genomics 13:545-545(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 253Imported.
  2. Aslett M.
    Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 253Imported.

Entry informationi

Entry nameiK4QL95_BORBO
AccessioniPrimary (citable) accession number: K4QL95
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: February 4, 2015
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.