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K4NP16 (K4NP16_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:HLA-A EMBL AFV46224.1
OrganismHomo sapiens (Human) EMBL AFV46224.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length273 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the MHC class I family. RuleBase RU004439

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS027648

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AFV46224.1
Non-terminal residue2731 EMBL AFV46224.1

Sequences

Sequence LengthMass (Da)Tools
K4NP16 [UniParc].

Last modified January 9, 2013. Version 1.
Checksum: 45C95164BFFCC2DF

FASTA27331,517
        10         20         30         40         50         60 
SHSMRYFTTS VSRPGRGEPR FIAVGYVDDT QFVRFDSDAA SQRMEPRAPW IEQEGPEYWD 

        70         80         90        100        110        120 
RNTRNVKAHS QIDRVDLGTL RGYYNQSEAG SHTIQMMYGC DVGSDGRFLR GYQQDAYDGK 

       130        140        150        160        170        180 
DYIALNEDLR SWTAADMAAQ ITQRKWEAAR VAEQLRAYLE GTCVEWLRRY LENGKETLQR 

       190        200        210        220        230        240 
TDPPKTHMTH HAVSDHEATL RCWALSFYPA EITLTWQRDG EDQTQDTELV ETRPAGDGTF 

       250        260        270 
QKWASVVVPS GQEQRYTCHV QHEGLPKPLT LRW 

« Hide

References

[1]"Identification of a novel HLA-A*33:03:11 allele by polymerase chain reaction sequence-based typing in a Chinese cord blood donor."
Zhang W., Tao S.D., Zhu F.M., He J., Lv H.J.
Tissue Antigens 82:59-60(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JX524132 Genomic DNA. Translation: AFV46224.1.

3D structure databases

ProteinModelPortalK4NP16.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEK4NP16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.30.500.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011161. MHC_I-like_Ag-recog.
IPR011162. MHC_I/II-like_Ag-recog.
IPR027648. MHC_I_a.
IPR001039. MHC_I_a_a1/a2.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00129. MHC_I. 1 hit.
[Graphical view]
PRINTSPR01638. MHCCLASSI.
SMARTSM00407. IGc1. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK4NP16_HUMAN
AccessionPrimary (citable) accession number: K4NP16
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: October 16, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.