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K4MJ59 (K4MJ59_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:HLA-DQB1 EMBL AFV26062.1
OrganismHomo sapiens (Human) EMBL AFV26062.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length183 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains Ig-like C1-type (immunoglobulin-like) domain. SAAS SAAS014745

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AFV26062.1
Non-terminal residue1831 EMBL AFV26062.1

Sequences

Sequence LengthMass (Da)Tools
K4MJ59 [UniParc].

Last modified January 9, 2013. Version 1.
Checksum: 1500D06772E5D203

FASTA18321,344
        10         20         30         40         50         60 
DFVYQFKGLC YFTNGTERVR GVTRHIYNRE EYVRFDSDVG VYRAVTPQGR PSAEYWNSQK 

        70         80         90        100        110        120 
EVLEGARASV DRVCRHNYEV AYRGILQRRV EPTVTISPSR TEALNHHNLL ICSVTDFYPS 

       130        140        150        160        170        180 
HIKVRWFRND QEETAGVVST PLIRNGDWTF QTLVMLEMTP QRGDVYTCHV EHPSLQSPIT 


VEW 

« Hide

References

[1]"Characterization of a Novel DQB1*05 Allele."
Hoffman A.D., Scott I., Palmer P., Partel R., Endres R.O.
Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JX494227 Genomic DNA. Translation: AFV26062.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.10.320.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
IPR011162. MHC_I/II-like_Ag-recog.
IPR014745. MHC_II_a/b_N.
IPR000353. MHC_II_b_N.
[Graphical view]
PfamPF07654. C1-set. 1 hit.
PF00969. MHC_II_beta. 1 hit.
[Graphical view]
ProDomPD000328. MHC_II_b_N. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00407. IGc1. 1 hit.
SM00921. MHC_II_beta. 1 hit.
[Graphical view]
SUPFAMSSF54452. SSF54452. 1 hit.
PROSITEPS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK4MJ59_HUMAN
AccessionPrimary (citable) accession number: K4MJ59
Entry history
Integrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: February 19, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.