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K4KMC3

- K4KMC3_SIMAS

UniProt

K4KMC3 - K4KMC3_SIMAS

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei134 – 1341UniRule annotation
Active sitei535 – 5351UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:M5M_11040Imported
OrganismiSimiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)Imported
Taxonomic identifieri1117647 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaSimiduia
ProteomesiUP000000466: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K4KMC3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSALRNQVKA LGSLLGQTIA DHEGQDCLDL IETIRLQSKA IDAGDQAALA
60 70 80 90 100
DLTGKISAAD DKTLLTIARA FSQFLNLANI AEQIYTVSDE AKTLIDRPDP
110 120 130 140 150
FASLRSQFEN QRWSAEAFTR AAEKLHMDLV LTAHPTEVTR RTLIHKYRQI
160 170 180 190 200
FDQLRRGDDV DMTRIQELIS QDWMTNSIRR IRPTPVDEAS WGLAVIEDSL
210 220 230 240 250
WEAVPRFLRE LDAQSEQITG KPLAPQITPL RMSSWMGGDR DGNPFVTAKL
260 270 280 290 300
TRQVIAMSRA KAAELYARDL EQLSMELSMM DASDDLWALL PEQHKDSEQP
310 320 330 340 350
YRELIRPVRK LLAHTREQMD ELYRTGSRSD NQPVLESVEQ LLTPLYQCYD
360 370 380 390 400
SLMRCGLTRI ARGYLLDTIR RIQCFGVGLI RLDIRQHSER HNDVMAEITR
410 420 430 440 450
ALGVGDYLSW SETERQAFLR AELDNPRPLL PIHFAPSAEV QEVLDTVQVI
460 470 480 490 500
AETPAEMMAI YIISMASQPS DVLLVELLQK ACGVKKPLPV APLFETLDDL
510 520 530 540 550
DNAEGVMRDL MAMPGYKARA KGRQYVMIGY SDSAKDAGVL AASWAQYRAQ
560 570 580 590 600
DALIKLHTAE GMDLTLFHGR GGTIGRGGGP AHAAILSQPP GSVNGGLRVT
610 620 630 640 650
EQGETIRYKF GLPKLAVRSL SLYASAILEA LLAPPPEPKA EWRALLDSMA
660 670 680 690 700
DTACKTYRYY IREEPDFVRY FRQATPEQEL GQLPLGSRPA KRKAEGGIES
710 720 730 740 750
LRAIPWIFAW SQNRLVLPSW LGFGTALKQA VDNGSADLLK DMQANWPFMR
760 770 780 790 800
SRLAMMEMVY SKSDSHIASL YDARLVDDSL KGLGQALRNQ LSEDTATLLN
810 820 830 840 850
FLGQQALLEN DAWGAQSLDV REIYLVPLHL LQIELLARVR AKQDVDQVSD
860 870
CNRALMVAMA GIAAGMRNTG
Length:870
Mass (Da):97,170
Last modified:January 9, 2013 - v1
Checksum:i0C874E9879902F29
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003746 Genomic DNA. Translation: AFU99385.1.
RefSeqiYP_006917115.1. NC_018868.3.

Genome annotation databases

EnsemblBacteriaiAFU99385; AFU99385; M5M_11040.
GeneIDi13836568.
KEGGisaga:M5M_11040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003746 Genomic DNA. Translation: AFU99385.1 .
RefSeqi YP_006917115.1. NC_018868.3.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AFU99385 ; AFU99385 ; M5M_11040 .
GeneIDi 13836568.
KEGGi saga:M5M_11040.

Phylogenomic databases

KOi K01595.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Simiduia agarivorans SA1(T), a marine bacterium able to degrade a variety of polysaccharides."
    Lin S.Y., Shieh W.Y., Chen J.S., Tang S.L.
    Genome Announc. 1:E00039-E00039(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 21679 / JCM 13881 / BCRC 17597 / SA1Imported.

Entry informationi

Entry nameiK4KMC3_SIMAS
AccessioniPrimary (citable) accession number: K4KMC3
Entry historyi
Integrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: October 29, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3