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K4KMC3

- K4KMC3_SIMAS

UniProt

K4KMC3 - K4KMC3_SIMAS

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (09 Jan 2013)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei134 – 1341UniRule annotation
    Active sitei535 – 5351UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:M5M_11040Imported
    OrganismiSimiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1)Imported
    Taxonomic identifieri1117647 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaSimiduia
    ProteomesiUP000000466: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K4KMC3-1 [UniParc]FASTAAdd to Basket

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    MSALRNQVKA LGSLLGQTIA DHEGQDCLDL IETIRLQSKA IDAGDQAALA    50
    DLTGKISAAD DKTLLTIARA FSQFLNLANI AEQIYTVSDE AKTLIDRPDP 100
    FASLRSQFEN QRWSAEAFTR AAEKLHMDLV LTAHPTEVTR RTLIHKYRQI 150
    FDQLRRGDDV DMTRIQELIS QDWMTNSIRR IRPTPVDEAS WGLAVIEDSL 200
    WEAVPRFLRE LDAQSEQITG KPLAPQITPL RMSSWMGGDR DGNPFVTAKL 250
    TRQVIAMSRA KAAELYARDL EQLSMELSMM DASDDLWALL PEQHKDSEQP 300
    YRELIRPVRK LLAHTREQMD ELYRTGSRSD NQPVLESVEQ LLTPLYQCYD 350
    SLMRCGLTRI ARGYLLDTIR RIQCFGVGLI RLDIRQHSER HNDVMAEITR 400
    ALGVGDYLSW SETERQAFLR AELDNPRPLL PIHFAPSAEV QEVLDTVQVI 450
    AETPAEMMAI YIISMASQPS DVLLVELLQK ACGVKKPLPV APLFETLDDL 500
    DNAEGVMRDL MAMPGYKARA KGRQYVMIGY SDSAKDAGVL AASWAQYRAQ 550
    DALIKLHTAE GMDLTLFHGR GGTIGRGGGP AHAAILSQPP GSVNGGLRVT 600
    EQGETIRYKF GLPKLAVRSL SLYASAILEA LLAPPPEPKA EWRALLDSMA 650
    DTACKTYRYY IREEPDFVRY FRQATPEQEL GQLPLGSRPA KRKAEGGIES 700
    LRAIPWIFAW SQNRLVLPSW LGFGTALKQA VDNGSADLLK DMQANWPFMR 750
    SRLAMMEMVY SKSDSHIASL YDARLVDDSL KGLGQALRNQ LSEDTATLLN 800
    FLGQQALLEN DAWGAQSLDV REIYLVPLHL LQIELLARVR AKQDVDQVSD 850
    CNRALMVAMA GIAAGMRNTG 870
    Length:870
    Mass (Da):97,170
    Last modified:January 9, 2013 - v1
    Checksum:i0C874E9879902F29
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003746 Genomic DNA. Translation: AFU99385.1.
    RefSeqiYP_006917115.1. NC_018868.3.

    Genome annotation databases

    EnsemblBacteriaiAFU99385; AFU99385; M5M_11040.
    GeneIDi13836568.
    KEGGisaga:M5M_11040.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003746 Genomic DNA. Translation: AFU99385.1 .
    RefSeqi YP_006917115.1. NC_018868.3.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AFU99385 ; AFU99385 ; M5M_11040 .
    GeneIDi 13836568.
    KEGGi saga:M5M_11040.

    Phylogenomic databases

    KOi K01595.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Simiduia agarivorans SA1(T), a marine bacterium able to degrade a variety of polysaccharides."
      Lin S.Y., Shieh W.Y., Chen J.S., Tang S.L.
      Genome Announc. 1:E00039-E00039(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 21679 / JCM 13881 / BCRC 17597 / SA1Imported.

    Entry informationi

    Entry nameiK4KMC3_SIMAS
    AccessioniPrimary (citable) accession number: K4KMC3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 9, 2013
    Last sequence update: January 9, 2013
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3