Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

K4CNB2

- K4CNB2_SOLLC

UniProt

K4CNB2 - K4CNB2_SOLLC

Protein
Submitted name:

Uncharacterized protein

Gene

Solyc08g077530.2

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. beta-amylase activity Source: InterPro

    GO - Biological processi

    1. polysaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:Solyc08g077530.2Imported
    OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
    Taxonomic identifieri4081 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
    ProteomesiUP000004994: Chromosome 8

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 14 family.UniRule annotation

    Phylogenomic databases

    KOiK01177.
    OMAiSHERIME.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR001371. Glyco_hydro_14B_pln.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF01373. Glyco_hydro_14. 1 hit.
    [Graphical view]
    PRINTSiPR00750. BETAAMYLASE.
    PR00842. GLHYDLASE14B.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K4CNB2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTLTLQSSAS FINFKETKGV KTPDEFLGMV SFAQAKPSSC RLVAKSSMQE    50
    AQLSHERIME VRKIEKREKL HELTANHSNS STRVPVFVML PLDTMTMGGN 100
    LNRPRAMNAS LMALKSSGAE GVMVDAWWGL VEKDGPLKYN WEGYAELVNM 150
    CREHGLKLQV VMSFHQCGGN VGDSCSIPLP PWVLEEISKN PDLVYTDRSG 200
    RRNPEYLSLG CDMLPVLKGR TPIQVYTDYM RSFRERFNNY LGNIIVEIQV 250
    GMGPCGELRY PAYPESNGTW RFPGIGEFQC YDKYMRASLA AAAKATGKDD 300
    WGQGGPHDSG QYNQFPEDTG FFQRDGTWNS DYGQFFLEWY SGKLLEHGDR 350
    ILAAGESIYQ GTGAKLSGKI AGIHWHYNTR SHAAELTAGY YNTRHRDGYL 400
    PIARMLAKHG VVLNFTCMEM RDGEQPQSAN CSPEGLVRQV KTAARTAEVE 450
    LAGENALERY DGGAFSQVLA TSMSDSGNGL SAFTFLRMNK RLFEPENWRN 500
    LVQFVKSMSE GGRNATLPEC DSSRTDLYVR FIKESHSKKA TEVAVV 546
    Length:546
    Mass (Da):61,031
    Last modified:November 28, 2012 - v1
    Checksum:i506A0B933BB9C197
    GO

    Sequence databases

    RefSeqiXP_004245844.1. XM_004245796.1.

    Genome annotation databases

    EnsemblPlantsiSolyc08g077530.2.1; Solyc08g077530.2.1; Solyc08g077530.2.
    GeneIDi101253815.
    KEGGisly:101253815.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_004245844.1. XM_004245796.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Solyc08g077530.2.1 ; Solyc08g077530.2.1 ; Solyc08g077530.2 .
    GeneIDi 101253815.
    KEGGi sly:101253815.

    Phylogenomic databases

    KOi K01177.
    OMAi SHERIME.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR001371. Glyco_hydro_14B_pln.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF01373. Glyco_hydro_14. 1 hit.
    [Graphical view ]
    PRINTSi PR00750. BETAAMYLASE.
    PR00842. GLHYDLASE14B.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing."
      Budiman M.A., Mao L., Wood T.C., Wing R.A.
      Genome Res. 10:129-136(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Heinz 1706Imported.
    2. "Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments."
      Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.
      Theor. Appl. Genet. 112:72-84(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Heinz 1706Imported.
    3. EnsemblPlants
      Submitted (OCT-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Heinz 1706Imported.

    Entry informationi

    Entry nameiK4CNB2_SOLLC
    AccessioniPrimary (citable) accession number: K4CNB2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3