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K4CNB2

- K4CNB2_SOLLC

UniProt

K4CNB2 - K4CNB2_SOLLC

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Protein
Submitted name:

Uncharacterized protein

Gene
Solyc08g077530.2
Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-amylase activity Source: InterPro

GO - Biological processi

  1. polysaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Solyc08g077530.2Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Chromosome 8

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

KOiK01177.
OMAiSHERIME.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K4CNB2-1 [UniParc]FASTAAdd to Basket

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MTLTLQSSAS FINFKETKGV KTPDEFLGMV SFAQAKPSSC RLVAKSSMQE    50
AQLSHERIME VRKIEKREKL HELTANHSNS STRVPVFVML PLDTMTMGGN 100
LNRPRAMNAS LMALKSSGAE GVMVDAWWGL VEKDGPLKYN WEGYAELVNM 150
CREHGLKLQV VMSFHQCGGN VGDSCSIPLP PWVLEEISKN PDLVYTDRSG 200
RRNPEYLSLG CDMLPVLKGR TPIQVYTDYM RSFRERFNNY LGNIIVEIQV 250
GMGPCGELRY PAYPESNGTW RFPGIGEFQC YDKYMRASLA AAAKATGKDD 300
WGQGGPHDSG QYNQFPEDTG FFQRDGTWNS DYGQFFLEWY SGKLLEHGDR 350
ILAAGESIYQ GTGAKLSGKI AGIHWHYNTR SHAAELTAGY YNTRHRDGYL 400
PIARMLAKHG VVLNFTCMEM RDGEQPQSAN CSPEGLVRQV KTAARTAEVE 450
LAGENALERY DGGAFSQVLA TSMSDSGNGL SAFTFLRMNK RLFEPENWRN 500
LVQFVKSMSE GGRNATLPEC DSSRTDLYVR FIKESHSKKA TEVAVV 546
Length:546
Mass (Da):61,031
Last modified:November 28, 2012 - v1
Checksum:i506A0B933BB9C197
GO

Sequence databases

RefSeqiXP_004245844.1. XM_004245796.1.

Genome annotation databases

EnsemblPlantsiSolyc08g077530.2.1; Solyc08g077530.2.1; Solyc08g077530.2.
GeneIDi101253815.
KEGGisly:101253815.

Cross-referencesi

Sequence databases

RefSeqi XP_004245844.1. XM_004245796.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Solyc08g077530.2.1 ; Solyc08g077530.2.1 ; Solyc08g077530.2 .
GeneIDi 101253815.
KEGGi sly:101253815.

Phylogenomic databases

KOi K01177.
OMAi SHERIME.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF01373. Glyco_hydro_14. 1 hit.
[Graphical view ]
PRINTSi PR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing."
    Budiman M.A., Mao L., Wood T.C., Wing R.A.
    Genome Res. 10:129-136(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Heinz 1706Imported.
  2. "Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments."
    Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.
    Theor. Appl. Genet. 112:72-84(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Heinz 1706Imported.
  3. EnsemblPlants
    Submitted (OCT-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Heinz 1706Imported.

Entry informationi

Entry nameiK4CNB2_SOLLC
AccessioniPrimary (citable) accession number: K4CNB2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 14, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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