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K4CNB2 (K4CNB2_SOLLC) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 14 family. RuleBase RU004157

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processpolysaccharide catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-amylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
K4CNB2 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 506A0B933BB9C197

FASTA54661,031
        10         20         30         40         50         60 
MTLTLQSSAS FINFKETKGV KTPDEFLGMV SFAQAKPSSC RLVAKSSMQE AQLSHERIME 

        70         80         90        100        110        120 
VRKIEKREKL HELTANHSNS STRVPVFVML PLDTMTMGGN LNRPRAMNAS LMALKSSGAE 

       130        140        150        160        170        180 
GVMVDAWWGL VEKDGPLKYN WEGYAELVNM CREHGLKLQV VMSFHQCGGN VGDSCSIPLP 

       190        200        210        220        230        240 
PWVLEEISKN PDLVYTDRSG RRNPEYLSLG CDMLPVLKGR TPIQVYTDYM RSFRERFNNY 

       250        260        270        280        290        300 
LGNIIVEIQV GMGPCGELRY PAYPESNGTW RFPGIGEFQC YDKYMRASLA AAAKATGKDD 

       310        320        330        340        350        360 
WGQGGPHDSG QYNQFPEDTG FFQRDGTWNS DYGQFFLEWY SGKLLEHGDR ILAAGESIYQ 

       370        380        390        400        410        420 
GTGAKLSGKI AGIHWHYNTR SHAAELTAGY YNTRHRDGYL PIARMLAKHG VVLNFTCMEM 

       430        440        450        460        470        480 
RDGEQPQSAN CSPEGLVRQV KTAARTAEVE LAGENALERY DGGAFSQVLA TSMSDSGNGL 

       490        500        510        520        530        540 
SAFTFLRMNK RLFEPENWRN LVQFVKSMSE GGRNATLPEC DSSRTDLYVR FIKESHSKKA 


TEVAVV 

« Hide

References

« Hide 'large scale' references
[1]"A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing."
Budiman M.A., Mao L., Wood T.C., Wing R.A.
Genome Res. 10:129-136(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Heinz 1706 EnsemblPlants Solyc08g077530.2.1.
[2]"Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments."
Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.
Theor. Appl. Genet. 112:72-84(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Heinz 1706 EnsemblPlants Solyc08g077530.2.1.
[3]EnsemblPlants
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: cv. Heinz 1706 EnsemblPlants Solyc08g077530.2.1.

Cross-references

Sequence databases

RefSeqXP_004245844.1. XM_004245796.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSolyc08g077530.2.1; Solyc08g077530.2.1; Solyc08g077530.2.
GeneID101253815.
KEGGsly:101253815.

Phylogenomic databases

KOK01177.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR001371. Glyco_hydro_14B_pln.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSPR00750. BETAAMYLASE.
PR00842. GLHYDLASE14B.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameK4CNB2_SOLLC
AccessionPrimary (citable) accession number: K4CNB2
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: February 19, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)