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K4CIK0

- K4CIK0_SOLLC

UniProt

K4CIK0 - K4CIK0_SOLLC

Protein
Submitted name:

Uncharacterized protein

Gene

Solyc08g007130.2

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. beta-amylase activity Source: InterPro

    GO - Biological processi

    1. maltose biosynthetic process Source: EnsemblPlants/Gramene
    2. polysaccharide catabolic process Source: InterPro
    3. response to cold Source: EnsemblPlants/Gramene

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:Solyc08g007130.2Imported
    OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
    Taxonomic identifieri4081 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
    ProteomesiUP000004994: Chromosome 8

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast stroma Source: EnsemblPlants/Gramene

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 14 family.UniRule annotation

    Phylogenomic databases

    KOiK01177.
    OMAiEHANCSP.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF01373. Glyco_hydro_14. 1 hit.
    [Graphical view]
    PRINTSiPR00750. BETAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    K4CIK0-1 [UniParc]FASTAAdd to Basket

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    MALTPCSSTS FINKKERKNY RTHDDISSMI CFAKINPPSY NLKAKSYNQE    50
    VQFLNPNMEE KEKFHMLTSG THSNNSSSTK VPVFVMLPLD TISIGGNMNK 100
    PRAMNASLMA LKGAGVEGVM VDCWWGLVEK DGPLKYNWEG YDELVKMVQA 150
    NGLKLQVVMS FHQCGGNVGD SCSIPLPPWV LEEISKNPDI VYTDRSGRRN 200
    PEYISLGCDQ LPVLRGRTPI QVYTDYMRSF REKFKNYLGD VIVEIQVGMG 250
    PCGELRYPSY PESNGTWRFP GIGEFQCYDK YMKASLAASA HAMGKESWGR 300
    GGPHDSGQYN QFPEETGFFK KDGTWNSEYG QFFLEWYSRK LLEHGDNILA 350
    SAEGIFKGTG CKLSGKVAGI HWHYNTRSHA AELTAGYYNT RNKDGYLPIA 400
    RMFAKRGVVF NFTCMEMRDG EQPHSANCSP EGLVRQVKNA TRNVGVELAG 450
    ENALERYDGG GYAQVLSTSR ADSGNGLSAF TYLRLNKRLF EPENWRNLVE 500
    FVKNMSEGGS TRLPECDSSR TDLYVRFVKQ THAKRTTEVA VV 542
    Length:542
    Mass (Da):60,890
    Last modified:November 28, 2012 - v1
    Checksum:i9C637E6EE0A21127
    GO

    Sequence databases

    RefSeqiXP_004244551.1. XM_004244503.1.

    Genome annotation databases

    EnsemblPlantsiSolyc08g007130.2.1; Solyc08g007130.2.1; Solyc08g007130.2.
    GeneIDi101259175.
    KEGGisly:101259175.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_004244551.1. XM_004244503.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Solyc08g007130.2.1 ; Solyc08g007130.2.1 ; Solyc08g007130.2 .
    GeneIDi 101259175.
    KEGGi sly:101259175.

    Phylogenomic databases

    KOi K01177.
    OMAi EHANCSP.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF01373. Glyco_hydro_14. 1 hit.
    [Graphical view ]
    PRINTSi PR00750. BETAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing."
      Budiman M.A., Mao L., Wood T.C., Wing R.A.
      Genome Res. 10:129-136(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Heinz 1706Imported.
    2. "Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments."
      Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.
      Theor. Appl. Genet. 112:72-84(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Heinz 1706Imported.
    3. EnsemblPlants
      Submitted (OCT-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: cv. Heinz 1706Imported.

    Entry informationi

    Entry nameiK4CIK0_SOLLC
    AccessioniPrimary (citable) accession number: K4CIK0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3