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K4CIK0

- K4CIK0_SOLLC

UniProt

K4CIK0 - K4CIK0_SOLLC

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Protein
Submitted name:

Uncharacterized protein

Gene

Solyc08g007130.2

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. beta-amylase activity Source: InterPro

GO - Biological processi

  1. polysaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Solyc08g007130.2Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994: Chromosome 8

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 14 family.UniRule annotation

Phylogenomic databases

InParanoidiK4CIK0.
KOiK01177.
OMAiEHANCSP.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K4CIK0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALTPCSSTS FINKKERKNY RTHDDISSMI CFAKINPPSY NLKAKSYNQE
60 70 80 90 100
VQFLNPNMEE KEKFHMLTSG THSNNSSSTK VPVFVMLPLD TISIGGNMNK
110 120 130 140 150
PRAMNASLMA LKGAGVEGVM VDCWWGLVEK DGPLKYNWEG YDELVKMVQA
160 170 180 190 200
NGLKLQVVMS FHQCGGNVGD SCSIPLPPWV LEEISKNPDI VYTDRSGRRN
210 220 230 240 250
PEYISLGCDQ LPVLRGRTPI QVYTDYMRSF REKFKNYLGD VIVEIQVGMG
260 270 280 290 300
PCGELRYPSY PESNGTWRFP GIGEFQCYDK YMKASLAASA HAMGKESWGR
310 320 330 340 350
GGPHDSGQYN QFPEETGFFK KDGTWNSEYG QFFLEWYSRK LLEHGDNILA
360 370 380 390 400
SAEGIFKGTG CKLSGKVAGI HWHYNTRSHA AELTAGYYNT RNKDGYLPIA
410 420 430 440 450
RMFAKRGVVF NFTCMEMRDG EQPHSANCSP EGLVRQVKNA TRNVGVELAG
460 470 480 490 500
ENALERYDGG GYAQVLSTSR ADSGNGLSAF TYLRLNKRLF EPENWRNLVE
510 520 530 540
FVKNMSEGGS TRLPECDSSR TDLYVRFVKQ THAKRTTEVA VV
Length:542
Mass (Da):60,890
Last modified:November 28, 2012 - v1
Checksum:i9C637E6EE0A21127
GO

Sequence databases

RefSeqiXP_004244551.1. XM_004244503.1.

Genome annotation databases

EnsemblPlantsiSolyc08g007130.2.1; Solyc08g007130.2.1; Solyc08g007130.2.
GeneIDi101259175.
KEGGisly:101259175.

Cross-referencesi

Sequence databases

RefSeqi XP_004244551.1. XM_004244503.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Solyc08g007130.2.1 ; Solyc08g007130.2.1 ; Solyc08g007130.2 .
GeneIDi 101259175.
KEGGi sly:101259175.

Phylogenomic databases

InParanoidi K4CIK0.
KOi K01177.
OMAi EHANCSP.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF01373. Glyco_hydro_14. 1 hit.
[Graphical view ]
PRINTSi PR00750. BETAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing."
    Budiman M.A., Mao L., Wood T.C., Wing R.A.
    Genome Res. 10:129-136(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Heinz 1706Imported.
  2. "Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments."
    Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.
    Theor. Appl. Genet. 112:72-84(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Heinz 1706Imported.
  3. EnsemblPlants
    Submitted (OCT-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Heinz 1706Imported.

Entry informationi

Entry nameiK4CIK0_SOLLC
AccessioniPrimary (citable) accession number: K4CIK0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3