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Protein
Submitted name:

Uncharacterized protein

Gene

Solyc04g006970.2

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Solyc04g006970.2Imported
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)Imported
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
ProteomesiUP000004994 Componenti: Chromosome 4

Family & Domainsi

Phylogenomic databases

InParanoidiK4BNK4.
KOiK01595.
OMAiCGMGVIA.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

K4BNK4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDVTDDIAE EISFQGFDDD CRLLQSLLND VLHREVGPKF MEKVERTRVL
60 70 80 90 100
AQGACNMRMA GIEDTAELLE KQLASELSKM TLEEALDLAR TFSHYLNLMG
110 120 130 140 150
IAETHHRVRK TRGVVQLSKS CDDIFNHLLQ SGVPPDQLYD TVCKQAVEIV
160 170 180 190 200
LTAHPTQINR RTLQYKHIRI AHLLEYNDRP DLGIEDRDML IEDLVREMTS
210 220 230 240 250
IWQTDELRRH KPTPVDEARA GLHIVEQTLW KAVPHYLRRV SNALKKHTGR
260 270 280 290 300
PLPLTCTPIR FGSWMGGDRD GNPNVTAKVT KDVSLLSRWM AIDLYVREVD
310 320 330 340 350
SLRFELSMTQ CSERFARLAH EILEKGNTSD NQFDSWNHSS NWNQSKHQGQ
360 370 380 390 400
HAPPFPTQLP TRADLPSCTA CSDVESHYPR LALPGTGVIP LKNKDGQTTS
410 420 430 440 450
KVGPLDGDSS KNTEKAYGNG NITPRSASLS ASQLLQRKLF AENQIGRASF
460 470 480 490 500
QKLMEPSSSH RPGIAPYRIV LGDVKEKLLK SRKRLELLLE DLPCDHDPMD
510 520 530 540 550
YYETSDQLLE PLLLCYDSLQ SCGSGVLADG RLADLIRRVS TFGMVLMKLD
560 570 580 590 600
LRQESGRHSE ALDAITNYLD MGTYSEWDEE KKLDFLIKEL KGKRPLVPPT
610 620 630 640 650
IEVPPDVKEV LDTFKVAAEL GSDSLGAYVI SMASNASDVL AVELLQKDAR
660 670 680 690 700
LAVAGELGRP CPGGTLRVVP LFETVKDLRE AGSVIRRLLS IDWYRDHVIK
710 720 730 740 750
NHNGHQEVMV GYSDSGKDAG RFTAAWELYK AQEDVVAACN EYGIKITLFH
760 770 780 790 800
GRGGSIGRGG GPTYLAIQSQ PPGSVMGSLR STEQGEMVQA KFGLPQMAVR
810 820 830 840 850
QLEIYTTAVL LATLRPPQPP REQKWRNLMD DISNLSCRSY RSTVYENPEF
860 870 880 890 900
LTYFHEATPQ AELGYLNIGS RPTRRKSSGG IGQLRAIPWI FAWTQTRFVL
910 920 930 940 950
PAWLGVGAGL KGVCDKGHTE DLRAMYREWP FFQSTVDLIE MVLGKADIPI
960 970 980 990 1000
AKHYDDVLVS ESRRGLGAEM RRELLSTGNY VLQVTGHEKL SANNRSLRRL
1010 1020 1030 1040 1050
IESRLPYLNP MNILQVEILK RLRSDEDNHK LRDALLITIN GIAAGMRNTG
Length:1,050
Mass (Da):117,873
Last modified:November 28, 2012 - v1
Checksum:i6299662B5BDCEE2F
GO

Sequence databases

RefSeqiXP_004236950.1. XM_004236902.2.

Genome annotation databases

EnsemblPlantsiSolyc04g006970.2.1; Solyc04g006970.2.1; Solyc04g006970.2.
GeneIDi101245149.
KEGGisly:101245149.

Cross-referencesi

Sequence databases

RefSeqiXP_004236950.1. XM_004236902.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSolyc04g006970.2.1; Solyc04g006970.2.1; Solyc04g006970.2.
GeneIDi101245149.
KEGGisly:101245149.

Phylogenomic databases

InParanoidiK4BNK4.
KOiK01595.
OMAiCGMGVIA.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 2 hits.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing."
    Budiman M.A., Mao L., Wood T.C., Wing R.A.
    Genome Res. 10:129-136(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Heinz 1706Imported.
  2. "Characteristics of the tomato nuclear genome as determined by sequencing undermethylated EcoRI digested fragments."
    Wang Y., van der Hoeven R.S., Nielsen R., Mueller L.A., Tanksley S.D.
    Theor. Appl. Genet. 112:72-84(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Heinz 1706Imported.
  3. EnsemblPlants
    Submitted (OCT-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: cv. Heinz 1706Imported.

Entry informationi

Entry nameiK4BNK4_SOLLC
AccessioniPrimary (citable) accession number: K4BNK4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 27, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.