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K3ZA66

- K3ZA66_SETIT

UniProt

K3ZA66 - K3ZA66_SETIT

Protein

Ribulose bisphosphate carboxylase small chain

Gene

Si023437m.g

Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (28 Nov 2012)
      Previous versions | rss
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    Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotationSAAS annotation

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. monooxygenase activity Source: UniProtKB-KW
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-KW
    2. photorespiration Source: UniProtKB-KW
    3. photosynthesis Source: UniProtKB-KW
    4. response to blue light Source: EnsemblPlants/Gramene
    5. response to far red light Source: EnsemblPlants/Gramene
    6. response to red light Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
    Gene namesi
    Name:Si023437m.gImported
    OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
    Taxonomic identifieri4555 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePaniceaeSetaria
    ProteomesiUP000004995: Unplaced

    Subcellular locationi

    GO - Cellular componenti

    1. apoplast Source: EnsemblPlants/Gramene
    2. chloroplast envelope Source: EnsemblPlants/Gramene
    3. chloroplast stroma Source: EnsemblPlants/Gramene
    4. cytosolic ribosome Source: EnsemblPlants/Gramene
    5. membrane Source: EnsemblPlants/Gramene
    6. thylakoid Source: EnsemblPlants/Gramene

    Keywords - Cellular componenti

    ChloroplastSAAS annotation, Plastid

    Interactioni

    Subunit structurei

    8 large chains + 8 small chains.UniRule annotationSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO small chain family.UniRule annotation

    Phylogenomic databases

    KOiK01602.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR024681. RuBisCO_sc.
    IPR000894. RuBisCO_sc_dom.
    IPR024680. RuBisCO_ssu_N.
    [Graphical view]
    PfamiPF12338. RbcS. 1 hit.
    PF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    PRINTSiPR00152. RUBISCOSMALL.
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    K3ZA66-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPTAMAATS VAPFQGLKST AGLPVSRRST SSGFGNVSNG GRIRCMQVWP    50
    IGGKKFETLS YLPPLSTDDL LKQIDYLIRK NWIPCLEFSK VGFVYRENNR 100
    SPGYYDGRYW TMWKLPMFGC TEATQVYAEL EECKKAYPDA YIRILGFDNV 150
    RQVQCIMFIA YKPPGCEETG VAK 173
    Length:173
    Mass (Da):19,467
    Last modified:November 28, 2012 - v1
    Checksum:i59423B5060CFAF0B
    GO

    Sequence databases

    RefSeqiXP_004962611.1. XM_004962554.1.

    Genome annotation databases

    EnsemblPlantsiSi023437m; Si023437m; Si023437m.g.
    GeneIDi101768770.
    KEGGisita:101768770.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_004962611.1. XM_004962554.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Si023437m ; Si023437m ; Si023437m.g .
    GeneIDi 101768770.
    KEGGi sita:101768770.

    Phylogenomic databases

    KOi K01602.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR024681. RuBisCO_sc.
    IPR000894. RuBisCO_sc_dom.
    IPR024680. RuBisCO_ssu_N.
    [Graphical view ]
    Pfami PF12338. RbcS. 1 hit.
    PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    PRINTSi PR00152. RUBISCOSMALL.
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Foxtail millet: a sequence-driven grass model system."
      Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
      Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Yugu1Imported.
    2. EnsemblPlants
      Submitted (OCT-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Yugu1Imported.

    Entry informationi

    Entry nameiK3ZA66_SETIT
    AccessioniPrimary (citable) accession number: K3ZA66
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2012
    Last sequence update: November 28, 2012
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3