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Protein

Alpha-amylase

Gene

LOC101776395

Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei203NucleophileUniRule annotation1
Active sitei228Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
Name:LOC101776395Imported
ORF Names:SETIT_017283mgImported
OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
Taxonomic identifieri4555 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePanicodaePaniceaeCenchrinaeSetaria
Proteomesi
  • UP000004995 Componenti: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24UniRule annotationAdd BLAST24
ChainiPRO_501060496225 – 427Alpha-amylaseUniRule annotationAdd BLAST403

Interactioni

Protein-protein interaction databases

STRINGi4555.Si017283m.

Structurei

3D structure databases

SMRiK3YSN8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 365AamyInterPro annotationAdd BLAST341
Domaini366 – 426Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiKOG0471. Eukaryota.
COG0366. LUCA.
InParanoidiK3YSN8.
KOiK01176.
OMAiGEQGYMP.
OrthoDBiEOG093600FS.

Family and domain databases

InterProiView protein in InterPro
IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

K3YSN8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASKGMLLAL FIALLGLSSN SAAGQVLFQG FNWESWKQNG GWYNFLMGKV
60 70 80 90 100
DDIAEAGITH VWLPPASHSL AEQGYLPGRL YDLDASRYGN EAQLKSLIEA
110 120 130 140 150
FHDKGVKVIA DIVINHRTAE HQDGRGIYCM FEGGTPDSRL DWGPHMICSD
160 170 180 190 200
DRAYSDGTGN PDTGADFGGA PDIDHLNPRV QRELIGWLNW LKTDIGFDAW
210 220 230 240 250
RLDFAKGYSA DVAKVYIDNT EPCFAVAEIW TSLAYGGDGK PYYDQNAHRQ
260 270 280 290 300
ELVNWVDRVG RSGPATTFDF TTKGILNVAV DGELWRLRGA DGKAPGLIGW
310 320 330 340 350
WPAKAVTFID NHDTGSTQHM WPFPADKVMQ GYAYILTHPG SPMIFYDHFF
360 370 380 390 400
DWGLKNEIAH LVSIRDRHGI QPDSELHIIE ADADLYLAEI DGKVIVKIGS
410 420
RFDCEHLIPE GFHVTAHGDG YAVWEKI
Length:427
Mass (Da):47,500
Last modified:November 28, 2012 - v1
Checksum:iA9EE9EA4A6D0904B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM003528 Genomic DNA. Translation: KQL31646.1.
RefSeqiXP_004954023.1. XM_004953966.1.

Genome annotation databases

EnsemblPlantsiSi017283m; Si017283m; Si017283m.g.
GeneIDi101776395.
GrameneiSi017283m; Si017283m; Si017283m.g.
KEGGisita:101776395.

Similar proteinsi

Entry informationi

Entry nameiK3YSN8_SETIT
AccessioniPrimary (citable) accession number: K3YSN8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 25, 2017
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported