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K3YSN8 (K3YSN8_SETIT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length427 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2031Nucleophile By similarity PIRSR PIRSR001028-1
Active site2281Proton donor By similarity PIRSR PIRSR001028-1

Sequences

Sequence LengthMass (Da)Tools
K3YSN8 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: A9EE9EA4A6D0904B

FASTA42747,500
        10         20         30         40         50         60 
MASKGMLLAL FIALLGLSSN SAAGQVLFQG FNWESWKQNG GWYNFLMGKV DDIAEAGITH 

        70         80         90        100        110        120 
VWLPPASHSL AEQGYLPGRL YDLDASRYGN EAQLKSLIEA FHDKGVKVIA DIVINHRTAE 

       130        140        150        160        170        180 
HQDGRGIYCM FEGGTPDSRL DWGPHMICSD DRAYSDGTGN PDTGADFGGA PDIDHLNPRV 

       190        200        210        220        230        240 
QRELIGWLNW LKTDIGFDAW RLDFAKGYSA DVAKVYIDNT EPCFAVAEIW TSLAYGGDGK 

       250        260        270        280        290        300 
PYYDQNAHRQ ELVNWVDRVG RSGPATTFDF TTKGILNVAV DGELWRLRGA DGKAPGLIGW 

       310        320        330        340        350        360 
WPAKAVTFID NHDTGSTQHM WPFPADKVMQ GYAYILTHPG SPMIFYDHFF DWGLKNEIAH 

       370        380        390        400        410        420 
LVSIRDRHGI QPDSELHIIE ADADLYLAEI DGKVIVKIGS RFDCEHLIPE GFHVTAHGDG 


YAVWEKI 

« Hide

References

« Hide 'large scale' references
[1]"Foxtail millet: a sequence-driven grass model system."
Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Yugu1 EnsemblPlants Si017283m.
[2]EnsemblPlants
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Yugu1 EnsemblPlants Si017283m.

Cross-references

Sequence databases

RefSeqXP_004954023.1. XM_004953966.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSi017283m; Si017283m; Si017283m.g.
GeneID101776395.
KEGGsita:101776395.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK3YSN8_SETIT
AccessionPrimary (citable) accession number: K3YSN8
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)