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K3YHS0 (K3YHS0_SETIT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2001Nucleophile By similarity PIRSR PIRSR001028-1
Active site2251Proton donor By similarity PIRSR PIRSR001028-1

Sequences

Sequence LengthMass (Da)Tools
K3YHS0 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: 9433ECD486C2FF65

FASTA43247,862
        10         20         30         40         50         60 
MKHSSSLGLL FLLALCSLVQ AQVLFQGFNW ESCKKQGGWY NSLKAKVDDI AKAGVTHVWL 

        70         80         90        100        110        120 
PPPSHSVSPQ GYMPGRLYDL DASKYGTAAE LKSLIAAFHR RGIQCVADIV INHRCADKKD 

       130        140        150        160        170        180 
ARGVYCIFEG GTPDERLDWG PGMICSDDTQ YSDGTGHRDT GEGFAAAPDI DHLNARVQRE 

       190        200        210        220        230        240 
LSAWLNWLKS DVGFDGWRLD FAKGYSPAIA KMYVKNTRPS FVVAEIWNSL SYNGDGKPSP 

       250        260        270        280        290        300 
NQDQRRQELV NWVQAVGKPA MAFDFTTKGL LQAGVQGELW RLRDSSGKAA GLIGWTPEKA 

       310        320        330        340        350        360 
VTFIDNHDTG STQKLWPFPS DKVMQGYAYI LTHPGVPCIF YDHMFDWNLK QEISTLTAIR 

       370        380        390        400        410        420 
ARNGIHAGSK LRILLADDDA YVAVVDEKVM VKIGTRYDVG NVIPSDFHPA AHGKDYCVWE 

       430 
KGTLRVPAGL HL 

« Hide

References

« Hide 'large scale' references
[1]"Foxtail millet: a sequence-driven grass model system."
Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Yugu1 EnsemblPlants Si013789m.
[2]EnsemblPlants
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Yugu1 EnsemblPlants Si013789m.

Cross-references

Sequence databases

RefSeqXP_004973671.1. XM_004973614.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSi013789m; Si013789m; Si013789m.g.
GeneID101767641.
KEGGsita:101767641.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK3YHS0_SETIT
AccessionPrimary (citable) accession number: K3YHS0
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)