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K3YHS0

- K3YHS0_SETIT

UniProt

K3YHS0 - K3YHS0_SETIT

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Protein
Alpha-amylase
Gene
Si013789m.g
Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei200 – 2001Nucleophile By similarityUniRule annotation
Active sitei225 – 2251Proton donor By similarityUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:Si013789m.gImported
OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
Taxonomic identifieri4555 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePaniceaeSetaria
ProteomesiUP000004995: Unplaced

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

K3YHS0-1 [UniParc]FASTAAdd to Basket

« Hide

MKHSSSLGLL FLLALCSLVQ AQVLFQGFNW ESCKKQGGWY NSLKAKVDDI    50
AKAGVTHVWL PPPSHSVSPQ GYMPGRLYDL DASKYGTAAE LKSLIAAFHR 100
RGIQCVADIV INHRCADKKD ARGVYCIFEG GTPDERLDWG PGMICSDDTQ 150
YSDGTGHRDT GEGFAAAPDI DHLNARVQRE LSAWLNWLKS DVGFDGWRLD 200
FAKGYSPAIA KMYVKNTRPS FVVAEIWNSL SYNGDGKPSP NQDQRRQELV 250
NWVQAVGKPA MAFDFTTKGL LQAGVQGELW RLRDSSGKAA GLIGWTPEKA 300
VTFIDNHDTG STQKLWPFPS DKVMQGYAYI LTHPGVPCIF YDHMFDWNLK 350
QEISTLTAIR ARNGIHAGSK LRILLADDDA YVAVVDEKVM VKIGTRYDVG 400
NVIPSDFHPA AHGKDYCVWE KGTLRVPAGL HL 432
Length:432
Mass (Da):47,862
Last modified:November 28, 2012 - v1
Checksum:i9433ECD486C2FF65
GO

Sequence databases

RefSeqiXP_004973671.1. XM_004973614.1.

Genome annotation databases

EnsemblPlantsiSi013789m; Si013789m; Si013789m.g.
GeneIDi101767641.
KEGGisita:101767641.

Cross-referencesi

Sequence databases

RefSeqi XP_004973671.1. XM_004973614.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Si013789m ; Si013789m ; Si013789m.g .
GeneIDi 101767641.
KEGGi sita:101767641.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Foxtail millet: a sequence-driven grass model system."
    Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
    Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Yugu1Imported.
  2. EnsemblPlants
    Submitted (OCT-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Yugu1Imported.

Entry informationi

Entry nameiK3YHS0_SETIT
AccessioniPrimary (citable) accession number: K3YHS0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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