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K3YHR9

- K3YHR9_SETIT

UniProt

K3YHR9 - K3YHR9_SETIT

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Protein
Alpha-amylase
Gene
Si013704m.g
Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei200 – 2001Nucleophile By similarityUniRule annotation
Active sitei225 – 2251Proton donor By similarityUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:Si013704m.gImported
OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
Taxonomic identifieri4555 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePaniceaeSetaria
ProteomesiUP000004995: Unplaced

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

K3YHR9-1 [UniParc]FASTAAdd to Basket

« Hide

MKHSSSLGFL FLLALCSLVQ AQVLFQGFNW ESCKKQGSWY NSLNAQVDDI    50
AKAGVTHVWL PPPSHSVSPQ GYMPGRLYDL DASKYGTAVE LKSLIAAFHR 100
RGIQCVADIV INHRCADKKD ARGVYCIFEG GTPDDRLDWG PGMICSDDTQ 150
YSDGTGHRDT GDGFAAAPDI DHLNARVQRE LIDWLNWLKS DVGYDGWRLD 200
FAKGYSPAIT KMYVENSKPS FVVAEIWNSL SYNGDGKPSP NQDQCRQELV 250
DWVQAVGEPA MAFDFTTKGL LQAAVQGELW RLRDSSGKAA GLIGWTPEKA 300
VTFIDNHDTG STQKMWPFPS DKVMQGYAYI LTHPGVPCIF YDHMFDLNLK 350
QEISTLAAIR ARNGIHAGSK LRILLADADA YVAIVDEKVM VKIGTRYDVG 400
NVIPSDFQPA AHGKDYCVWE KGSLRVPAGR HL 432
Length:432
Mass (Da):47,855
Last modified:November 28, 2012 - v1
Checksum:iF28FE05973489191
GO

Sequence databases

RefSeqiXP_004973672.1. XM_004973615.1.

Genome annotation databases

EnsemblPlantsiSi013788m; Si013788m; Si013704m.g.
GeneIDi101768040.
KEGGisita:101768040.

Cross-referencesi

Sequence databases

RefSeqi XP_004973672.1. XM_004973615.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Si013788m ; Si013788m ; Si013704m.g .
GeneIDi 101768040.
KEGGi sita:101768040.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Foxtail millet: a sequence-driven grass model system."
    Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
    Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Yugu1Imported.
  2. EnsemblPlants
    Submitted (OCT-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Yugu1Imported.

Entry informationi

Entry nameiK3YHR9_SETIT
AccessioniPrimary (citable) accession number: K3YHR9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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