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K3YHR9 (K3YHR9_SETIT) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2001Nucleophile By similarity PIRSR PIRSR001028-1
Active site2251Proton donor By similarity PIRSR PIRSR001028-1

Sequences

Sequence LengthMass (Da)Tools
K3YHR9 [UniParc].

Last modified November 28, 2012. Version 1.
Checksum: F28FE05973489191

FASTA43247,855
        10         20         30         40         50         60 
MKHSSSLGFL FLLALCSLVQ AQVLFQGFNW ESCKKQGSWY NSLNAQVDDI AKAGVTHVWL 

        70         80         90        100        110        120 
PPPSHSVSPQ GYMPGRLYDL DASKYGTAVE LKSLIAAFHR RGIQCVADIV INHRCADKKD 

       130        140        150        160        170        180 
ARGVYCIFEG GTPDDRLDWG PGMICSDDTQ YSDGTGHRDT GDGFAAAPDI DHLNARVQRE 

       190        200        210        220        230        240 
LIDWLNWLKS DVGYDGWRLD FAKGYSPAIT KMYVENSKPS FVVAEIWNSL SYNGDGKPSP 

       250        260        270        280        290        300 
NQDQCRQELV DWVQAVGEPA MAFDFTTKGL LQAAVQGELW RLRDSSGKAA GLIGWTPEKA 

       310        320        330        340        350        360 
VTFIDNHDTG STQKMWPFPS DKVMQGYAYI LTHPGVPCIF YDHMFDLNLK QEISTLAAIR 

       370        380        390        400        410        420 
ARNGIHAGSK LRILLADADA YVAIVDEKVM VKIGTRYDVG NVIPSDFQPA AHGKDYCVWE 

       430 
KGSLRVPAGR HL 

« Hide

References

« Hide 'large scale' references
[1]"Foxtail millet: a sequence-driven grass model system."
Doust A.N., Kellogg E.A., Devos K.M., Bennetzen J.L.
Plant Physiol. 149:137-141(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Yugu1 EnsemblPlants Si013788m.
[2]EnsemblPlants
Submitted (OCT-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Yugu1 EnsemblPlants Si013788m.

Cross-references

Sequence databases

RefSeqXP_004973672.1. XM_004973615.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSi013788m; Si013788m; Si013704m.g.
GeneID101768040.
KEGGsita:101768040.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameK3YHR9_SETIT
AccessionPrimary (citable) accession number: K3YHR9
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 9, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)